Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0383 | ATGCCGGATACACCATCGTCGCCGAAGAGCGGTGGCCGGTTGACGCTAATGGAGAATCTGCTCGGACTTCTCCGCATTCGCATCATTCGTGGTCTCAATCTTGCCGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTCGTCAAGATGGGAAAACAAAAATTGAAGACGCGGGTGATAAAGAAGGATGTCAATCCTGTATGGAATGAAGATCTAACTCTTTCTGTCAGCGACCCGAATCAACCAATTAAGCTGACTGTTTACGATCACGACACATTTACCAAGGATGACAAAATGGGATATGCCGAGTTTGATATCAAATCATTTATGGAAGCTCTGAAGATGGACTTATCAAATCTTCCGAGTGGAACCACAATCACGCGAATGCTACCGAGCAGGCAAAACTGTCTAGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAATCCAAGATATCTACCTTAGATTGAAAAACGTCGAATGCGGCGAAGTCGAAATCCAGTTGCAGTGGATTGATCTTCCAAACCCCAAAGGCTAA | 543 | 45.49 | MPDTPSSPKSGGRLTLMENLLGLLRIRIIRGLNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPVWNEDLTLSVSDPNQPIKLTVYDHDTFTKDDKMGYAEFDIKSFMEALKMDLSNLPSGTTITRMLPSRQNCLAEESCVVWKDGKVIQDIYLRLKNVECGEVEIQLQWIDLPNPKG | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3172026 | 3174829 | + | Maker00022099 | Lcy2g0383 | 625148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0383 | 180 | Pfam | C2 domain | 22 | 110 | IPR000008 | - | |
Lcy2g0383 | 180 | CDD | C2_ArfGAP | 21 | 164 | - | - | |
Lcy2g0383 | 180 | Gene3D | C2 domain | 18 | 179 | IPR035892 | - | |
Lcy2g0383 | 180 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 17 | 178 | IPR044562 | - | |
Lcy2g0383 | 180 | ProSiteProfiles | C2 domain profile. | 8 | 119 | IPR000008 | - | |
Lcy2g0383 | 180 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 18 | 173 | IPR035892 | - | |
Lcy2g0383 | 180 | SMART | C2_3c | 23 | 118 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1388 | Lcy-Chr10:37243195 | Lcy2g0383 | Lcy-Chr2:3172026 | 8.48E-68 | dispersed | |
Lcy12g0211 | Lcy-Chr12:2651305 | Lcy2g0383 | Lcy-Chr2:3172026 | 2.51E-82 | dispersed | |
Lcy1g0121 | Lcy-Chr1:1033618 | Lcy2g0383 | Lcy-Chr2:3172026 | 1.42E-40 | dispersed | |
Lcy2g0383 | Lcy-Chr2:3172026 | Lcy7g1196 | Lcy-Chr7:14166702 | 9.40E-61 | dispersed | |
Lcy2g0383 | Lcy-Chr2:3172026 | Lcy5g2379 | Lcy-Chr5:46585331 | 1.07E-91 | wgd |
Pathway information
