Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0383 ATGCCGGATACACCATCGTCGCCGAAGAGCGGTGGCCGGTTGACGCTAATGGAGAATCTGCTCGGACTTCTCCGCATTCGCATCATTCGTGGTCTCAATCTTGCCGTTCGTGATGTTCGCAGCAGCGATCCTTATGTTGTCGTCAAGATGGGAAAACAAAAATTGAAGACGCGGGTGATAAAGAAGGATGTCAATCCTGTATGGAATGAAGATCTAACTCTTTCTGTCAGCGACCCGAATCAACCAATTAAGCTGACTGTTTACGATCACGACACATTTACCAAGGATGACAAAATGGGATATGCCGAGTTTGATATCAAATCATTTATGGAAGCTCTGAAGATGGACTTATCAAATCTTCCGAGTGGAACCACAATCACGCGAATGCTACCGAGCAGGCAAAACTGTCTAGCTGAAGAGAGCTGTGTCGTCTGGAAAGATGGTAAAGTAATCCAAGATATCTACCTTAGATTGAAAAACGTCGAATGCGGCGAAGTCGAAATCCAGTTGCAGTGGATTGATCTTCCAAACCCCAAAGGCTAA 543 45.49 MPDTPSSPKSGGRLTLMENLLGLLRIRIIRGLNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPVWNEDLTLSVSDPNQPIKLTVYDHDTFTKDDKMGYAEFDIKSFMEALKMDLSNLPSGTTITRMLPSRQNCLAEESCVVWKDGKVIQDIYLRLKNVECGEVEIQLQWIDLPNPKG 180
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 3172026 3174829 + Maker00022099 Lcy2g0383 625148
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0383 180 Pfam C2 domain 22 110 IPR000008 -
Lcy2g0383 180 CDD C2_ArfGAP 21 164 - -
Lcy2g0383 180 Gene3D C2 domain 18 179 IPR035892 -
Lcy2g0383 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 17 178 IPR044562 -
Lcy2g0383 180 ProSiteProfiles C2 domain profile. 8 119 IPR000008 -
Lcy2g0383 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 173 IPR035892 -
Lcy2g0383 180 SMART C2_3c 23 118 IPR000008 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1388 Lcy-Chr10:37243195 Lcy2g0383 Lcy-Chr2:3172026 8.48E-68 dispersed
Lcy12g0211 Lcy-Chr12:2651305 Lcy2g0383 Lcy-Chr2:3172026 2.51E-82 dispersed
Lcy1g0121 Lcy-Chr1:1033618 Lcy2g0383 Lcy-Chr2:3172026 1.42E-40 dispersed
Lcy2g0383 Lcy-Chr2:3172026 Lcy7g1196 Lcy-Chr7:14166702 9.40E-61 dispersed
Lcy2g0383 Lcy-Chr2:3172026 Lcy5g2379 Lcy-Chr5:46585331 1.07E-91 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0383 - - - 0.0