Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0439 ATGCGTATGAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAACCTGCTCCATCAGACCCTGCCTTCAATGGATCAAAAGCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTCGCCAAATTCTACGGCCGAGCCGGCCTCGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGGTACTTCACCCATTTCTACTCTGTTTCGATTACTCTGTTTTGATTGCTCTGTTTCGATTGCTTACGGTGCTTTTTGTTTTGTGGCTCTTTCAGCTATTTTTAAATCTTTGCTATTCGAGGCCTGTGGCCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCATCCGAGATGGCGGCGTCGCACATGGGCCCCCCCTTGAAGGGCTGCGACATCCGTCACGTGTCCAAACAGCAAGGCTCCGCTGCCGGTTCAGCGCTCCGGAAGATCAAGACGCGGCGGCGGTTCAAACGCTCGGCTGCGGCGGCGAACAAGCCCAAGCCGAAGGAGGAGCCGGTGGCGGTGACCGAGTTCGTATTCGATGACCCGACCCGGGTTGTGTCGGAGCCCCGGTGTTTGAAGTTCGAGTTGGATAATTGGGTGGGCCATGAGTCGCCGGAGAAGGACTGCGGCAGCGACGACGCCGAGTGCTTGTCGGTGGAGACCGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGCACAGTCAGATGCTGACGTGA 837 57.95 MRMSCNGCRVLRKGCSETCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPGTSPISTLFRLLCFDCSVSIAYGAFCFVALSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSEMAASHMGPPLKGCDIRHVSKQQGSAAGSALRKIKTRRRFKRSAAAANKPKPKEEPVAVTEFVFDDPTRVVSEPRCLKFELDNWVGHESPEKDCGSDDAECLSVETVEASSVGQGGDVELELTLGFGHSQMLT 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3668471 3669307 + Maker00022025 Lcy2g0439 625204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0439 278 ProSiteProfiles LOB domain profile. 3 140 IPR004883 -
Lcy2g0439 278 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 271 - GO:0010468(PANTHER)
Lcy2g0439 278 Pfam Lateral organ boundaries (LOB) domain 4 63 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0439 Lcy-Chr2:3668471 Lcy9g2044 Lcy-Chr9:45312270 2.65E-39 dispersed
Lcy12g0154 Lcy-Chr12:1893317 Lcy2g0439 Lcy-Chr2:3668471 1.99E-81 transposed
Lcy2g0439 Lcy-Chr2:3668471 Lcy7g0468 Lcy-Chr7:4153870 3.55E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19697 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0439 - - - 0.0