Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0439 | ATGCGTATGAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAACCTGCTCCATCAGACCCTGCCTTCAATGGATCAAAAGCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTCGCCAAATTCTACGGCCGAGCCGGCCTCGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGGTACTTCACCCATTTCTACTCTGTTTCGATTACTCTGTTTTGATTGCTCTGTTTCGATTGCTTACGGTGCTTTTTGTTTTGTGGCTCTTTCAGCTATTTTTAAATCTTTGCTATTCGAGGCCTGTGGCCGGATTGTGAACCCGATTTTCGGGTCGGCCGGATTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCATCCGAGATGGCGGCGTCGCACATGGGCCCCCCCTTGAAGGGCTGCGACATCCGTCACGTGTCCAAACAGCAAGGCTCCGCTGCCGGTTCAGCGCTCCGGAAGATCAAGACGCGGCGGCGGTTCAAACGCTCGGCTGCGGCGGCGAACAAGCCCAAGCCGAAGGAGGAGCCGGTGGCGGTGACCGAGTTCGTATTCGATGACCCGACCCGGGTTGTGTCGGAGCCCCGGTGTTTGAAGTTCGAGTTGGATAATTGGGTGGGCCATGAGTCGCCGGAGAAGGACTGCGGCAGCGACGACGCCGAGTGCTTGTCGGTGGAGACCGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGCACAGTCAGATGCTGACGTGA | 837 | 57.95 | MRMSCNGCRVLRKGCSETCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPGTSPISTLFRLLCFDCSVSIAYGAFCFVALSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSEMAASHMGPPLKGCDIRHVSKQQGSAAGSALRKIKTRRRFKRSAAAANKPKPKEEPVAVTEFVFDDPTRVVSEPRCLKFELDNWVGHESPEKDCGSDDAECLSVETVEASSVGQGGDVELELTLGFGHSQMLT | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3668471 | 3669307 | + | Maker00022025 | Lcy2g0439 | 625204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0439 | 278 | ProSiteProfiles | LOB domain profile. | 3 | 140 | IPR004883 | - | |
Lcy2g0439 | 278 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 271 | - | GO:0010468(PANTHER) | |
Lcy2g0439 | 278 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 63 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0439 | Lcy-Chr2:3668471 | Lcy9g2044 | Lcy-Chr9:45312270 | 2.65E-39 | dispersed | |
Lcy12g0154 | Lcy-Chr12:1893317 | Lcy2g0439 | Lcy-Chr2:3668471 | 1.99E-81 | transposed | |
Lcy2g0439 | Lcy-Chr2:3668471 | Lcy7g0468 | Lcy-Chr7:4153870 | 3.55E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
19697 | None | None | None | None | Lcy | TF |
Pathway information
