Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0460 | ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGCTTCTTCACTCTCGACGCTCCTAATCCCCCCGGCCGCTCCCTCTCCGGCCCGGCCGACTGTCTCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCGGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGCTCTGCTGTTCTTCCGGTTCCCGCTCCGGCCAATTGGAGGAATTCCGCCGATCAGATTCCTGTTGGCAGCTATAACCCTTCCGAGACCCTCCTTGCCACCTCCCCTGTGGCCTCGCCTTCCAGTAGAACTGGGGACGAAGAGCTCGAGATGTCGGAGGACTCTTCCACCTCCGTTTGGTATCGCCGGAGCGGTTCCGGGAAGATTGCGTCCAGCTTTCCTGGCCTTGGAATCCACGTGGCGGCTAAGGCGTCGGAGAATTCGCAAGCGGTGCCTCTTAGGACGTTGGAACCTAACAAGCCTGCTGGAGTTGCAGAAAAGAATGGAGGGGCATCCACAGAGATACAGAATCAACAACCACCATCAAGTTCGAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGCGAATAAGTCAGGTACTGCTCCTGGTAAAGCTGTGAAGCAGCCTTCGGCTATGAAAGACATCACTGCTACACCTTCGGTTGCATCTATTGACAAAAGGGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCTCGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACATGACACCATTCATCCTGCCATTTACCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGTTGTATCGCAATGCTTCATGCATTTCAACAGGCAATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGCCTATGTTTCATTCTTTAATGAGTGCAGGCCATTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAGAAGATTATAATTGCAGATGAAGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCTCACGAGCTTGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTCATAGCAAGGGGCCTAAGTTGTACCTACACTCATATAAATGCTATTTCTTATGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTTCCAGTCTTAATCTGCTGTGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGACCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATATTAATTATTTAGATAATTTGACTGCTAAAGATCAACTACAACTTCTAAATTTAATGTATGACGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGTGGTCAGAATTGAGA | 1914 | 46.6 | MDARRGSRIVNPKVRQVGFFTLDAPNPPGRSLSGPADCLPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPVASPSSRTGDEELEMSEDSSTSVWYRRSGSGKIASSFPGLGIHVAAKASENSQAVPLRTLEPNKPAGVAEKNGGASTEIQNQQPPSSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTAPGKAVKQPSAMKDITATPSVASIDKRGGDRTLDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQHDTIHPAIYQVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGAYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIARGLSCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDINYLDNLTAKDQLQLLNLMYDATPSDYISMIVTDYGMWSELR | 638 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3932204 | 3937898 | + | Maker00022730 | Lcy2g0460 | 625225 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0460 | 638 | Gene3D | - | 439 | 637 | IPR042529 | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 94 | 128 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 20 | 63 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 94 | 111 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 179 | 197 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 255 | 277 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 36 | 51 | - | - | |
Lcy2g0460 | 638 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 46 | 634 | - | - | |
Lcy2g0460 | 638 | MobiDBLite | consensus disorder prediction | 154 | 277 | - | - | |
Lcy2g0460 | 638 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 299 | 635 | IPR037171 | - | |
Lcy2g0460 | 638 | Pfam | Initiation factor 2 subunit family | 346 | 634 | IPR000649 | GO:0044237(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0459 | Lcy-Chr2:3916800 | Lcy2g0460 | Lcy-Chr2:3932204 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0460 | K03680 | - | csv:101215104 | 1144.03 |