Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0552 | ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCTGATGCTTCTTTCATGGTTTTCAACTTCAGAGAAGGTGGTAGGCGAAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCGCTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGACATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTTCTTTAAACCCTCAGCCTTCCCAGCTGAGATATCTTCAACACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCAGACACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTCTACCTCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCTACACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCAATCAAGAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGTGTCCATTTGGATGAAGATCTGGTACGTGAGGAGATGATGTTTAGAGTTATGTTTCACACTGCATTTGTTAGATCAAACATTATGGTGCTGACCCGCGATGAAGTTGATGTCTTATGGGATGCGAGGGACCAGTTTCCTAAGGACTTCAAAGTTGAGGCACTCTTTTTGGATGCTGATGCTGATGCTGTTGGCTCCAATCTCACCACAGCCTTCGATGATGAAGATGCAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTATGAGGTTGAAGAGATCTTCAGTAATGCAATGGATGGGCAGGAAGCAAAGGGGTCCAATGATCCTCAGGTGGTCAATCATGTAGACCGTAAAGAAGATTGGAAGGAGGACTTGGATCCTCCTGCATTTCAAGATTGTGCATCTGACGATGGAAATCTTAAGCATGATAAGAAATCAAATTTTGATGCAGTGAAGGACATTACAGTGGATGACGTGAAGTATAAACTGGATGAAAAAATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCGAATTCCTTCTTGGTTGATGCTAATGTCCTGACTCATGTGAAAGCCCAGGGATTGGTAGATGATGCATACGAGAAATTTGAAGATACGGAAGAAAAGGATGATGGAAGAGATACTGCACCAGAGAAATTGGAGAACAAGGTTTTGCAGAAAAAGTTGAGTGCTGATGGTTCTAGACAAAAATTTGAAAAATTGCAAGCACCAATCCCTAAGAAACAGCCTATTTCAAGTGGAAAGCCGACCCTTGATATGGGTTTAGCCAAACAGAAAGTCAAACCGCAAGAGAATCAAGGTTTTTCTCCAAAACAAGCAAAGCCGAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCTTATACGAATTCTATGCACGTTTCTTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCACCATCGAAGGATACAAATGCAAATTCCAAAACAAAGGCTGCTGCCACCCTTTCTTCTCTGGTTGCTACAGATGTTTTTAATGAACGAAAAAATTATAAAGTGGATTCTGTAAGGTCTTCATACTCTGCACCTGGGGAACTCATGATTGGCCCACCATCTCCCGTTCAGTCAATTGAGGAGGGATATTCTTCCTCTGAAACTTTAAAACCACCGCATAGTGATCCACAGCTTGAAGTACCACCTCCCCCCCTGCCCACAAAGCCTCCATCTCCACATCTACCATCACCCCCCGGGGCAAATGCAATACCTCCTCCACCTCCTCCACCACCCCCTTCATTTCATCATACGGATTCAACATACTCTGCTCCACCACTTTCTGTGTCTGCAGCACCACCACCCACAGTTAACTCATCAAAGGCAGTGACTCCCCCTCCCCCTCCCCCTCCCCCTCCAGTCAGTAGGCAGAATAGCGAGAGGCTTTTGCCCCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCTGTTTCTACTGTAATGGTGGCTGGTTCTATACCTCCTCCACCACCCCCACCTCCACCTCCCTCTGGCCGGCCATCTACATTAAAGAATATGGGAAGTACACCTCCCGTACCTGTTTTTTCTCCTCCTTCAGCCCTTCTTGCCTTGTCACATAAAGGTATATCACTAGCACCACCCCCACGCCCACTTCCCCCATCATCTGTGATGCATGAAGCACTTGTTCCACCACCTCCGCCACCCCTGCCTACTTCAATATATGGTGGTAGAGCTCCACCACCCCCACCCTCACCCCCATCCCCATTAGTGCATGGGGCATTTCCTTCACCATCTTTAGTGAAAGGAGCACCACCTCCGCCGCCTCCGCCTCCGCCTCCGCCCATTCAATCTCCAACACCATCTTTATTACATGGAGCACCACCCCCACCCCCTCCACCACCTTCAAAGCATGGAGCCCCACCTCCACCACCTTCGCCACTTCCCCCATCTTTGCATGTCCCACCTCCACCACCTCCACCACCTCCCATGTATGGAACACCCCCTCCTCCACCCCCTCCGATGTATGGTACACCATCTCCTTCAATCCATTCAATGCAGGGGGTACCCCCTCCACCTCCTCCACCCCCTCCAATGCCTAGTGCATCCTCTCCTTTGATACATGGGGGGTCACCACCTCCTCCACCCCCTCCAATGCATGGGGCTTCTCCACCTCCGCCACCTCCGCCACCTCCACCACCTCCACCAATGCATGGGTCTACTCCTCCACCGCCGCCACCACCAATGTATGGGGCTCCACCACCACCACCACCACCACCACCAATGTATGGGGCTCCACCACCACCACCACCACCACCTTCTTTGTATGGGGCTCCTCCGCCACCACCACCTCCATTGCGTGGGGTTCCTCCACCACCGCCACCTCCACCAATGCATGGGGCTCCTCCACCGCCACCTCCACCAATGCGTGGGGCTCCTCCACCACCGCCACCTCCGCCAATGCATGGGGCTCCTCCACCACCGCCACCTCCGCCGATGCATGGGGCTCCTCCTCCACCGCCACCTCCGCCAATGCATGGGGCTCCCCCACTGCCACCTCCACCCATGCATGGGGCTCCTCCCCCACCGCCACCTCCAGCAATGCATGGAGCTCCTCCTCCACCACCACCACCGTTTTTGGGAGCCCCCCCACCACCTCCCCCACCCGGGGGTGGTGGAGCCCCTCCACCACCTCCCCCACCCGGGGGTGGTAGAGGCCCACCACCGCCTCCCCCACCTGGGGGTGGTAGAGCGCCACCCCCACCTCCCCCACCTGGGGGTGGTGGAGCCCCGGCACCCCCTCCTCCTCCTGGAGGTCGTGTTCCCGCCCCTCCTGGAGGTCCAGGTGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAAAGGAGCAAACGCTGCACCTGATCCAAGAGGTTTGTCTGCTGGAAGAGGACGTGGGCTATCACGCTCAAGTGCTACAGCACCTCGAAGGTCCTCCTTGAAGCCTCTACATTGGAGCAAAGTAACGAGGGCTCTACAAGGGAGCTTGTGGGAAGAGCTGCAGAGATATGGAGAGCCTCAAATTGCACCAGAGTTTGATGTGTCCGAGATAGAGACTCTTTTTTCTGCAACTGTTCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGAGCGAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGACGAGTCAGTATTAGATGTTGATCAGGTGGAAAATCTCATAAAGTTCTGTCCTACAAAGGAGGAGATGGAACTTCTTAAGGGATACACCGGTGACAAGGATAGCCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCGAAGATGAGAGTGTTCTCTTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGCTTAAATACTGTTAACTCCGCATGTGATGAGGTGAGGAATTCTGCTAAACTGAAGGACATTATGAAGAAAATTCTTTATTTGGGGAATACACTGAATCAAGGAACAGCGAGGGGTTCTGCCGTTGGCTTCAAGTTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACGCTAATGCATTATCTTTGCAAGGTCCTCGCTTCGAAGACACCCGCTCTTCTTAATTTTCATTTGGACCTGGGTAGCTTAGAGGCAGCAACCAAGATTCAATTGAAGTCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAAGCAGGAGCTTGTTGCTTCTGAAAGTGATGGCCCAGTCTCTGAAATTTTTCGCAAGACGCTGAAAGAATTCATTGCTAGTGCTGAGACAGAGGTGGGATCAGTGACAAATCTATACTCTGTTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGACCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACATTATTGAACTTTGTGAGATTGTTTCGGAAAGCACATGAAGAGAACTGCAAACAGGCTGAATTGGAAAAGAAAAAAGCTGATAAGGACGCTGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG | 5070 | 49.11 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLDMVYKQAPKELLHLLSSLNPQPSQLRYLQHISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSKLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECVHLDEDLVREEMMFRVMFHTAFVRSNIMVLTRDEVDVLWDARDQFPKDFKVEALFLDADADAVGSNLTTAFDDEDANETGAASPEEFYEVEEIFSNAMDGQEAKGSNDPQVVNHVDRKEDWKEDLDPPAFQDCASDDGNLKHDKKSNFDAVKDITVDDVKYKLDEKIYSDLNAVKDIAVDDGDMNSNSFLVDANVLTHVKAQGLVDDAYEKFEDTEEKDDGRDTAPEKLENKVLQKKLSADGSRQKFEKLQAPIPKKQPISSGKPTLDMGLAKQKVKPQENQGFSPKQAKPNAVSRWIPPNKGSYTNSMHVSYPPSRYNSAPAALASIAPSKDTNANSKTKAAATLSSLVATDVFNERKNYKVDSVRSSYSAPGELMIGPPSPVQSIEEGYSSSETLKPPHSDPQLEVPPPPLPTKPPSPHLPSPPGANAIPPPPPPPPPSFHHTDSTYSAPPLSVSAAPPPTVNSSKAVTPPPPPPPPPVSRQNSERLLPHSSTQPSWEQIYSSVSTVMVAGSIPPPPPPPPPPSGRPSTLKNMGSTPPVPVFSPPSALLALSHKGISLAPPPRPLPPSSVMHEALVPPPPPPLPTSIYGGRAPPPPPSPPSPLVHGAFPSPSLVKGAPPPPPPPPPPPIQSPTPSLLHGAPPPPPPPPSKHGAPPPPPSPLPPSLHVPPPPPPPPPMYGTPPPPPPPMYGTPSPSIHSMQGVPPPPPPPPPMPSASSPLIHGGSPPPPPPPMHGASPPPPPPPPPPPPPMHGSTPPPPPPPMYGAPPPPPPPPPMYGAPPPPPPPPSLYGAPPPPPPPLRGVPPPPPPPPMHGAPPPPPPPMRGAPPPPPPPPMHGAPPPPPPPPMHGAPPPPPPPPMHGAPPLPPPPMHGAPPPPPPPAMHGAPPPPPPPFLGAPPPPPPPGGGGAPPPPPPPGGGRGPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGRVPAPPGGPGGGPPPPPPLGAKGANAAPDPRGLSAGRGRGLSRSSATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSEIETLFSATVPKPADKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDSLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDEVRNSAKLKDIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEAATKIQLKSLAEEMQAIIKGLEKVKQELVASESDGPVSEIFRKTLKEFIASAETEVGSVTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKADKDAEMENAKGISLTKKSVK | 1689 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4730283 | 4746842 | + | Maker00021881 | Lcy2g0552 | 625317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0552 | 1689 | PANTHER | FORMIN-J | 1179 | 1676 | IPR051144 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 842 | 889 | - | - | |
Lcy2g0552 | 1689 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 336 | IPR035892 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 634 | 1289 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 558 | 590 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 684 | 724 | - | - | |
Lcy2g0552 | 1689 | Pfam | C2 domain of PTEN tumour-suppressor protein | 199 | 336 | IPR014020 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 767 | 792 | - | - | |
Lcy2g0552 | 1689 | Gene3D | - | 205 | 336 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 747 | 765 | - | - | |
Lcy2g0552 | 1689 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Lcy2g0552 | 1689 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1279 | 1677 | IPR015425 | - | |
Lcy2g0552 | 1689 | FunFam | Formin-like protein | 1279 | 1663 | - | - | |
Lcy2g0552 | 1689 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 1353 | 1678 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 667 | 681 | - | - | |
Lcy2g0552 | 1689 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Lcy2g0552 | 1689 | Pfam | Formin Homology 2 Domain | 1284 | 1651 | IPR015425 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 794 | 810 | - | - | |
Lcy2g0552 | 1689 | Coils | Coil | 1652 | 1681 | - | - | |
Lcy2g0552 | 1689 | Gene3D | Formin, FH2 domain | 1277 | 1663 | IPR042201 | - | |
Lcy2g0552 | 1689 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 204 | IPR029021 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 1664 | 1679 | - | - | |
Lcy2g0552 | 1689 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 13 | 186 | IPR029021 | - | |
Lcy2g0552 | 1689 | Coils | Coil | 1558 | 1582 | - | - | |
Lcy2g0552 | 1689 | SMART | it6_source | 686 | 1687 | IPR015425 | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 725 | 746 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 1664 | 1689 | - | - | |
Lcy2g0552 | 1689 | MobiDBLite | consensus disorder prediction | 896 | 1258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0552 | Lcy-Chr2:4730283 | Lcy9g1889 | Lcy-Chr9:43958041 | 7.38E-275 | dispersed | |
Lcy2g0552 | Lcy-Chr2:4730283 | Lcy5g2518 | Lcy-Chr5:47956296 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0552 | K28090 | - | csv:101215105 | 1255.35 |