Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0568 | ATGGCCACCGTCACTACTCAAGCTTCCGCCGCCGTATTCCGGCCATGCGCCGCCCGATCGAGATTCCTTTCTGGGTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAAACCCGTGGCTGCCTCGTCGTCTTCATCTCTCAAGGTCGAAGCCAAGAAGGGAGAGTGGTTGCCCGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGACAACGGATTCGACCCACTGGGACTGGCGGAGGACCCAGAGAACTTGAGGTGGTTCGTGCAGGCGGAACTCGTCAACGGGCGGTGGGCGATGTTGGGCGTCGCCGGAATGCTTCTGCCGGAAGTTTTCACGAAGATCGGAATCATCAACGCCCCACAATGGTACGACGCCGGAAAGGCAGAGTACTTCGCATCGTCTTCAACCCTGTTCGTGATCGAGTTCATCCTCTTCCATTACGTCGAAATCAGAAGATGGCAGGACATTAAAAACCCCGGCAGCGTGAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCTCCAAACGAAGTCGGCTACCCTGGTGGCATTTTCAATCCCCTGAATTTCGCCCCGACTCTTGAGGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAATGTGACAGGGAAGGGGCCGTTCGACAACCTGTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTCCAGACGTTCGGTGGCAACTGA | 759 | 54.94 | MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVAASSSSSLKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4882718 | 4884860 | + | Maker00022517 | Lcy2g0568 | 625333 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0568 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 16 | 245 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Lcy2g0568 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Lcy2g0568 | 252 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 63 | 242 | - | - | |
Lcy2g0568 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
Lcy2g0568 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g2071 | Lcy-Chr13:39623077 | Lcy2g0568 | Lcy-Chr2:4882718 | 6.23E-68 | dispersed | |
Lcy2g0568 | Lcy-Chr2:4882718 | Lcy2g0986 | Lcy-Chr2:9184473 | 2.41E-67 | dispersed | |
Lcy10g1770 | Lcy-Chr10:42098067 | Lcy2g0568 | Lcy-Chr2:4882718 | 1.09E-47 | transposed | |
Lcy9g0892 | Lcy-Chr9:29874696 | Lcy2g0568 | Lcy-Chr2:4882718 | 9.69E-19 | transposed | |
Lcy10g1345 | Lcy-Chr10:36589985 | Lcy2g0568 | Lcy-Chr2:4882718 | 6.77E-26 | transposed | |
Lcy2g0568 | Lcy-Chr2:4882718 | Lcy5g2537 | Lcy-Chr5:48148995 | 8.66E-168 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0568 | K08910 | - | csv:101222701 | 487.263 |