Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0599 | ATGGAAGAAAAGGGCGAGAAGCCTGAGGTTCTGGAGGCTGTATTGAAGGAAACTGTGGACTTGGAAAACATACCCATTGAGGAGGTTTTTGATAATCTGAGATGTAGCAAAGAGGGTCTTACCACAGCGGCTGCTGAGGAACGCCTTGTAATTTTTGGTCACAACAAGCTTGAAGAGAAGAAGGAAAGTAAATTCTTAAAGTTTTTGGGGTTTATGTGGAATCCCCTCTCATGGGTAATGGAAGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCTCCTGACTGGCAAGATTTTGTTGGTATTATCGCACTGTTGCTTATCAACTCAACAATCAGTTTTATTGAGGAAAACAATGCCGGTAACGCTGCAGCTGCTCTAATGGCTAGTTTAGCTCCCCAAGCCAAGGTTCTACAATTTTCTGCTCTTACAGGCGAGTCCCTTCCTGTTACCAAAGGTCCCGGCGACGGCATATACTCTGGTTCTACTTGCAAACAAGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTCCATACTTTCTTTGGCAAGGCTGCTCACCTTGTTGACACCACTAATCAAGTGGGCCACTTCCAAAAGATTCTGAACCTTGCGCACAATAAGTCGGAGATTGAGCGCAAAGTTCATGCCGTGATTGACAAGTTTGCAGAACGAGGTTTACGCTCTCTTGCTGTGGCATACCAGGAAGTTCCAGATTGTAGGAAGGAAAGTGCTGGAGGTCCATGGCAGTTTATTGGCCTTCTGCCACTGTTCGACCCACCAAGGCATGATAGTGCAGAGACAATAAGGAGGGCTTTAAATCTTGGAGTGAATGTGAAGATGATTACTGGTGACCAGCTGGCCATAGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCCTCATCTGCTTTATTAGGTCAGGACAAGGACGAGTCCATAGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCTGATGGTTTTGCTGGTGTTTTTCCTGAGCACAAATATGAGATTGTAAAGCGTCTTCAAGCAAGGAAACATATCTGTGGGATGACTGGCGATGGAGTAAATGATGCTCCAGCCCTTAAAAAAGCAGACATAGGCATAGCTGTCGCTGATGCTACTGATGCTGCTCGTAGTGCTTCAGATATAGTCCTTACAGAGCCTGGTCTGAGTGTTATCATTAGTGCTGTTTTGACCAGCCGAGCAATCTTTCAGAGGATGAAAAATTACACTATATATGCAGTTTCGATCACTATTCGTATAGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTCCCACCTTTTATGGTGCTCATCATTGCCATTCTCAATGATGGTACAATAATGACGATATCGAAAGATAGAGTGAAACCATCTCCTTTGCCTGATAGCTGGAAGCTGGCGGAAATTTTTACTACTGGCATTATACTTGGTGGCTACTTGGCAATGATGACTGTTATCTTCTTTTGGGCAGCTTATAAAACAGACTTCTTTCCACGGATCTTTGGGGTGTCAACTCTTGAGAAAACTGCACATGATGACATTAGGAAACTTGCCTCAGCGATATATTTGCAAGTAAGTACTATAAGTCAGGCTCTCATATTTGTTACACGCTCGCGAAGTTGGTCGTATGTGGAGCGCCCTGGGTTACTGTTGGTTGCAGCTTTTCTGGTTGCACAACTGGTTGCTACTTTAATTGCGGTTTATGCAAATTGGAGCTTTGCTGCCATTGAAGGAATTGGATGGGGTTGGGCTGGTGTTATCTGGCTTTACAACATCATCTTTTACATCCCACTTGATCTCATCAAGTTCTTTATACGATATGCTTTGAGTGGGAGGGCTTGGGATCTTGTTATTGAACAAAGGATTGCCTTTACAAGGCAAAAGGACTTCGGTAAGGAACAACGGGAGCTACAATGGGCTCATGCACAAAGAACATTACATGGATTGCAAGCACCTGACGCCAAGATGTTCCACGAGCGAACTCACTTCACCGAGCTCAATCAGATGGCCGAAGAAGCCAAAAGGAGAGCTGAAATTGCAAGGTTGAGGGAACTACACACCCTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGACTTGACATCGACACGATCCAGCAAGCTTACACAGTGTGA | 2187 | 44.99 | MEEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIALLLINSTISFIEENNAGNAAAALMASLAPQAKVLQFSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDCRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPRIFGVSTLEKTAHDDIRKLASAIYLQVSTISQALIFVTRSRSWSYVERPGLLLVAAFLVAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHERTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5111766 | 5119875 | - | Maker00022229 | Lcy2g0599 | 625364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0599 | 728 | Pfam | Cation transporter/ATPase, N-terminus | 23 | 86 | IPR004014 | - | |
Lcy2g0599 | 728 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 20 | 625 | IPR023298 | - | |
Lcy2g0599 | 728 | FunFam | Plasma membrane ATPase | 256 | 410 | - | - | |
Lcy2g0599 | 728 | Pfam | haloacid dehalogenase-like hydrolase | 219 | 376 | - | - | |
Lcy2g0599 | 728 | Gene3D | - | 677 | 728 | - | - | |
Lcy2g0599 | 728 | NCBIfam | HAD-IC family P-type ATPase | 337 | 450 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | Coils | Coil | 679 | 699 | - | - | |
Lcy2g0599 | 728 | PRINTS | H+-transporting ATPase (proton pump) signature | 362 | 378 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | PRINTS | H+-transporting ATPase (proton pump) signature | 393 | 418 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | PRINTS | H+-transporting ATPase (proton pump) signature | 219 | 237 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | PRINTS | H+-transporting ATPase (proton pump) signature | 334 | 350 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | PRINTS | H+-transporting ATPase (proton pump) signature | 538 | 559 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Lcy2g0599 | 728 | FunFam | ATPase 4 plasma membrane-type | 347 | 593 | - | - | |
Lcy2g0599 | 728 | Gene3D | - | 146 | 197 | - | - | |
Lcy2g0599 | 728 | SMART | Cation_ATPase_N_a_2 | 20 | 92 | IPR004014 | - | |
Lcy2g0599 | 728 | SUPERFAMILY | Calcium ATPase, transduction domain A | 143 | 193 | IPR008250 | - | |
Lcy2g0599 | 728 | FunFam | Membrane H(+)-ATPase1 | 202 | 262 | - | - | |
Lcy2g0599 | 728 | SUPERFAMILY | HAD-like | 254 | 408 | IPR036412 | - | |
Lcy2g0599 | 728 | Gene3D | - | 198 | 262 | IPR023299 | GO:0000166(InterPro) | |
Lcy2g0599 | 728 | Gene3D | - | 71 | 145 | - | - | |
Lcy2g0599 | 728 | Gene3D | - | 364 | 624 | - | - | |
Lcy2g0599 | 728 | Pfam | E1-E2 ATPase | 142 | 207 | - | - | |
Lcy2g0599 | 728 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 145 | 207 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0599 | Lcy-Chr2:5111766 | Lcy9g0731 | Lcy-Chr9:24866584 | 0 | dispersed | |
Lcy10g1984 | Lcy-Chr10:43942630 | Lcy2g0599 | Lcy-Chr2:5111766 | 0 | wgd | |
Lcy2g0599 | Lcy-Chr2:5111766 | Lcy5g2280 | Lcy-Chr5:45789954 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0599 | K01535 | - | csv:101217264 | 986.097 |