Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0603 | ATGGAAGTTTTAGGGTTTATCACCAACAAATGGATTGCAACGGCCCTCGGGATTTGGATCCAATGCATCTGCGGTGCCTCCTACACCTTCAGCATCTATTCTTCGGCTCTCAAATCCACTCAGGGCTACGATCAATCCACCCTCGACACCGTTTCCGTTTTCAAGGACATCGGCGCCAACGCCGGCGTCATTTCCGGCTTTCTCTACTCCGCCGTCACTCCCGCCTCCTGCCGATCGAGCTCCGCTGGGCCATGGGTGGTCCACGCGGCGGGAGCGATTCAGTGCTTCCTCGGATATATTTTCATCTGGGCGGCCGTCTCCGGTGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACCGCGAATGTGGTGACCGGCGTTCACAATTTTGCGCACTATAGCGGGACGATTGTCGGCATCATGAAGGGATATCTTGGTCTTAGTGGAGCACTGCTAATCCAAGTTTATAACACGGCGTGCAATGGAGAACCAAGTAATTTTCTCCTCATGCTGGCTGTATTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAGCGTCTAGAAATGAGATGAAGCATTTGAACTCATTGTCTGCGCTTGCTGTAATTGTTGCTTTTTACTTGATGGTTGTCATCATTTTGAACAACACTTTCACCCTTTCATCATGGACTCGTTTCATTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGGAATCGCCATTAATGCTCAGAAGGAGGAGAACTTTAGAGGGTCATCTCCATCACTCTTCACTGGAGAAAGTCCTGTTCTTAACAAACCCAAGTCAGTGAATGCAGAGGATTCTGTGGAATATCACGAGTTGCCGAGTGATGAGAGCCAGAGAATGGCTGCTGCAAACTCCAAACCTCCTCAATCCATGAATGTCTTGGAAGCTATACGCACCGTAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAGCTTGGCCAATCTCTTGGCTACACAGCAACAGAGACAAAGACATTCGTTTCCTTGTGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGCTACACCTCTGATTTTCTTCTCCACTCATATGGCTGGGCAAGGCCATTGTTAATGGCACTTACTCTTCTGATAATGAGTGGTGGCCACATCGTGATCGCCTCTGGTTTCTCTGGAAATCTCTATGTGGGTTCAATTCTTGTTGGCATATGCTACGGCTCACAGTGGTCACTGATGCCCACAATCACTTCAGAGATATTTGGCTTAGAGCATATGGGAACTATTTTCAACACCATAGCCATAGCCAGCCCTCTGGGGTCTTACATCTTTTCGGTTCGAGTCATCGGCTACATTTACGACCGAGAAGCCGCCGGTAAACATGGCTCCTGCTCCGGCACACACTGTTTTGTAGTATCTTTTCTGGTCATGGCCGCCGTGGCTTTCTTGGGTTTTCTTGTTGCTGCTGCTCTCTTCTTTCGAACCAGGAGATTTTACCGACTGGCTTTGCAAAGAAGAGTTCATGAATTGAGTGAATATGCCTTTGCAGATATATGGATCGCTACAGTTGCCAGCATTTGGATTCAATGCATCTGCGGCCCATCCTACACCTTCGGCATCTACTCCTCCGCCCTCAAATCAACTCAAAACTACCATCAATCCACTCTCGACACTGTCTCCGTCTTCAAAGACATCGGCGCCACCGCCGGAGTTCTCGCCGGCTTCCTCTACTCCGCCGTCGTCTCCACCAATCGCCCACGTGGCCCCTGGATCGTCCTCACCGTCGGAGCAATCCAGTGCTTCCTCGGTTACATTTTCATATGGGCCGCCGTCTCCGGCCTAATCCCTCGGCCGCCGGTGCCGGCCATGTGCCTGTTCATGTTTCTAGCCGTCCATGCCCAAGTTTTCTTCAACACGGCCAATGTCGTCACTGGCGTCCATAACTTCCAGCTCTACGGCGGCACCATTCTCGGCATTCTAAAGGGATTTCTAGGTCTCAGTGGAGCAGTTCTGATTCAATTCTCGAACACACTCTGCAATCGAGACCCTGTAGCATTTCTTTTAATGCTTGCGATCTTGCCGGCGCTCACGACGCTTCTGCTCATGAGATTCGTCGTCATCGACAAAACAGAGACCGGAAACGAATCGAAACATTTGAACTCCTTCTCGTCAATCGCTCTGATAATCTCCGGTTATCTCACGATTCTCATCATTTTAGACAATTCCCTCACCCTTCCAACATGGGCTCGCATCTTCGCCTTCGTTCTACTCCTAACCCTCATCGCTTCCCCTCTCGGAATCGCAATCAGAGCAAAAACAGAGGACTCTGTTTTCAGAACCAAGCTTGAAGAATCCCTTGAATACCGTCAAATTCCCAGTGAAGAACAGACCCACGATCAGCAAGTGATCGTTTCCGATAGAGACATTGATCTAATCGAGGCCACTGGAACTTTAGACTTCTGGGTATTGTTTCTTTCGATAATGTGCTCGATGGGTTCTGGATTGGCCACCATAAACAACATGAATCAACTCGGCCAATCTCTCGGCTACGGCACAGTCGAGATCAACACCTTGGTTTCCTTGTGGAGCATTTGGAGTTTCCTTGGCCGCCTCGGAGCAGGTTATATTTCTGATATTCTCCTACGCAAATTAGGCTGGGCAAGGCCATTGTTAATGGCCATAACTCTGCTAGCAATGAGCGTCGGCCACATCATAATTGCTTTGGGCTTCACTGGGAATTTATACGTTGGATCAGTGATCGTGGGGATTTGTTATGGAGCTCAAATCTCGCTGATGCCTGCAATTACGGCGGAGATATTTGGAATAAAGCATATGGGCACCATTTACAACGCCATCAATGTGGCCTGTCCGATTGGATCTTATATTTTATCTGTTAGAATCGTTGGGTTCATATATGACAGAGAAGCCTCTTCTGAAGACAACTCCTGCTCCGGCAAACACTGTTTTATGATGTCTTTTCTGATCATGGCGGCTGTGGATTTGCTGGGTTTTGTTGTTGCTGTTGCTCTGTTCTTTCGGACCAGGAGATTCTATCGACTTCTTGTGCAGAGAAGACTCAAAGATTAG | 3186 | 48.52 | MEVLGFITNKWIATALGIWIQCICGASYTFSIYSSALKSTQGYDQSTLDTVSVFKDIGANAGVISGFLYSAVTPASCRSSSAGPWVVHAAGAIQCFLGYIFIWAAVSGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTACNGEPSNFLLMLAVLPTLLSIMFMWFVRIDKTASRNEMKHLNSLSALAVIVAFYLMVVIILNNTFTLSSWTRFITFSILLILLAAPLGIAINAQKEENFRGSSPSLFTGESPVLNKPKSVNAEDSVEYHELPSDESQRMAAANSKPPQSMNVLEAIRTVNFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMALTLLIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGKHGSCSGTHCFVVSFLVMAAVAFLGFLVAAALFFRTRRFYRLALQRRVHELSEYAFADIWIATVASIWIQCICGPSYTFGIYSSALKSTQNYHQSTLDTVSVFKDIGATAGVLAGFLYSAVVSTNRPRGPWIVLTVGAIQCFLGYIFIWAAVSGLIPRPPVPAMCLFMFLAVHAQVFFNTANVVTGVHNFQLYGGTILGILKGFLGLSGAVLIQFSNTLCNRDPVAFLLMLAILPALTTLLLMRFVVIDKTETGNESKHLNSFSSIALIISGYLTILIILDNSLTLPTWARIFAFVLLLTLIASPLGIAIRAKTEDSVFRTKLEESLEYRQIPSEEQTHDQQVIVSDRDIDLIEATGTLDFWVLFLSIMCSMGSGLATINNMNQLGQSLGYGTVEINTLVSLWSIWSFLGRLGAGYISDILLRKLGWARPLLMAITLLAMSVGHIIIALGFTGNLYVGSVIVGICYGAQISLMPAITAEIFGIKHMGTIYNAINVACPIGSYILSVRIVGFIYDREASSEDNSCSGKHCFMMSFLIMAAVDLLGFVVAVALFFRTRRFYRLLVQRRLKD | 1061 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5160545 | 5166837 | + | Maker00022479 | Lcy2g0603 | 625368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0603 | 1061 | CDD | MFS_Mch1p_like | 552 | 1036 | - | - | |
Lcy2g0603 | 1061 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 9 | 532 | - | GO:0016020(PANTHER) | |
Lcy2g0603 | 1061 | Gene3D | MFS general substrate transporter like domains | 752 | 1052 | IPR036259 | - | |
Lcy2g0603 | 1061 | CDD | MFS_Mch1p_like | 10 | 517 | - | - | |
Lcy2g0603 | 1061 | Pfam | Major Facilitator Superfamily | 856 | 1049 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Lcy2g0603 | 1061 | SUPERFAMILY | MFS general substrate transporter | 753 | 1049 | IPR036259 | - | |
Lcy2g0603 | 1061 | MobiDBLite | consensus disorder prediction | 275 | 312 | - | - | |
Lcy2g0603 | 1061 | SUPERFAMILY | MFS general substrate transporter | 216 | 530 | IPR036259 | - | |
Lcy2g0603 | 1061 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 851 | 1061 | IPR020846 | GO:0022857(InterPro) | |
Lcy2g0603 | 1061 | Pfam | Nodulin-like | 552 | 801 | IPR010658 | - | |
Lcy2g0603 | 1061 | Pfam | Nodulin-like | 10 | 263 | IPR010658 | - | |
Lcy2g0603 | 1061 | Gene3D | MFS general substrate transporter like domains | 324 | 532 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0603 | Lcy-Chr2:5160545 | Lcy2g0605 | Lcy-Chr2:5176176 | 5.92E-208 | dispersed | |
Lcy2g0603 | Lcy-Chr2:5160545 | Lcy2g0604 | Lcy-Chr2:5171988 | 1.14E-304 | tandem |
Pathway information
