Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0621 ATGGCGACGCTTGGAGAGCTCTTCCGCCGCAACCCCACCGAGGAAGTTGCTGGGGTTTCTGATGATTCGAATCAGAGCAGCTCGAGGGAGCTTCACGTTCTTGCTGTTGATGACAGCCTCGTCGATCGCAAGGTTATCGAGCGGTTGCTGAAGATCTCGTCGTGTAAAGTGACTGCTGTTGAGAGTGGGAGAAGTGCTTTGCAATATCTGGGGTTGGATGGTGAAACCAGTTCTGTGCAGTTTAATAATACATATCAATGGCTGAAAGAGAATTTTGATGAACAGGAATCATCGGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAACATTTTGGCTCGAATAGACAACTGCTTGAAGGAAGGAGCTGAAGAATTCATAGTGAAGCCTGTAAAACTGTCTGATGTGAAAAGATTGAAAGATTTCATTATCAAAGGAGAGAATGAAGGGAAGAAAATTGGTCTCAAAAGGAAGCTCCATCTTGATCACGATCTTCATCCTTTGTCTCCGGGGTCTCCGACACCGTCGGTGGCAGCTTTCGACCATTGTCAAAGATTTATGCAACGATCACAGACATCGTCACGACCGTCGCCGATCACATATTCATCAAAGAAACCCAGGTTCCTCAATGGTGACTTATCCACATGA 654 45.87 MATLGELFRRNPTEEVAGVSDDSNQSSSRELHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGETSSVQFNNTYQWLKENFDEQESSAFREIPVVIMSSENILARIDNCLKEGAEEFIVKPVKLSDVKRLKDFIIKGENEGKKIGLKRKLHLDHDLHPLSPGSPTPSVAAFDHCQRFMQRSQTSSRPSPITYSSKKPRFLNGDLST 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5307640 5310101 - Maker00022654 Lcy2g0621 625386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0621 217 Gene3D - 11 83 - -
Lcy2g0621 217 MobiDBLite consensus disorder prediction 189 217 - -
Lcy2g0621 217 Gene3D - 84 160 - -
Lcy2g0621 217 SUPERFAMILY CheY-like 30 139 IPR011006 -
Lcy2g0621 217 ProSiteProfiles Response regulatory domain profile. 32 146 IPR001789 GO:0000160(InterPro)
Lcy2g0621 217 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 190 IPR045279 GO:0009736(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0621 Lcy-Chr2:5307640 Lcy7g0695 Lcy-Chr7:6447304 1.57E-31 dispersed
Lcy2g0621 Lcy-Chr2:5307640 Lcy7g0216 Lcy-Chr7:1896514 3.52E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0621 K14492 - csv:101214143 278.1