Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0627 | ATGGCTTTCTTTCCTCCTGCCGCTTTTCTTTTTGCGACTCGCGATCTCGTCACGATCGCAGGCGGACCGTCGTACAACGTTCCATTAGGGCGAGAAGACAGCCTCGTCTCGAAATCTTCATCCGTGGAAGGCAACGTTCCGAAGGCGGATCAATCAATCGACGAGATGATCAAGCTATTCACCGCGAAAGGCTTCACGATTCAAGAAATGGTAGCGCTATACGGCGGACGCACGATCGGATTCTCAAATTGCAAGGAATTCAGCGAGCGGATCTTCAATTTCAGCAAAACAGCACCAACAGATCCAGAGATCCATCCTAAGTTCGCCGAGGCTTTGAAGAAGACCTGCGCCGGTTACGAGAAGAATCCGGGAATGTCGGCGTACAGCGACGCCGTGACGCCGGGAAAGTTCGACAACCTGTACTACCAGAATCTGCTGAGAGGAATGGGACTCTCGGTGTCCGATCACGCGCTGGTGAAGGATCCGAGGACGAAGAAGTTCGTGGAGATGTACGCCGGAAACCAGGCATTGTTCTTCAAGGATTTCGCACAGGCCATGGAGAAGATGAGCGTTCGTGAGGTGAAAACTGGTGGGAAAGGAGAAGTGAGGAGGAGATGCGATGTGTTCAATTCAATCCAAGCTTGA | 645 | 52.09 | MAFFPPAAFLFATRDLVTIAGGPSYNVPLGREDSLVSKSSSVEGNVPKADQSIDEMIKLFTAKGFTIQEMVALYGGRTIGFSNCKEFSERIFNFSKTAPTDPEIHPKFAEALKKTCAGYEKNPGMSAYSDAVTPGKFDNLYYQNLLRGMGLSVSDHALVKDPRTKKFVEMYAGNQALFFKDFAQAMEKMSVREVKTGGKGEVRRRCDVFNSIQA | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5376375 | 5377367 | - | Maker00022340 | Lcy2g0627 | 625392 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0627 | 214 | PRINTS | Plant peroxidase signature | 21 | 36 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Plant peroxidase signature | 68 | 80 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Plant peroxidase signature | 184 | 197 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Plant peroxidase signature | 128 | 143 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Plant peroxidase signature | 144 | 161 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | SUPERFAMILY | Heme-dependent peroxidases | 10 | 210 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | Gene3D | - | 11 | 210 | - | - | |
Lcy2g0627 | 214 | ProSiteProfiles | Plant heme peroxidase family profile. | 11 | 210 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PANTHER | - | 10 | 210 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Haem peroxidase superfamily signature | 130 | 145 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Haem peroxidase superfamily signature | 69 | 84 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | PRINTS | Haem peroxidase superfamily signature | 21 | 33 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | FunFam | Peroxidase | 47 | 189 | - | - | |
Lcy2g0627 | 214 | Pfam | Peroxidase | 10 | 174 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy2g0627 | 214 | Gene3D | Peroxidase, domain 2 | 47 | 189 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0627 | Lcy-Chr2:5376375 | Lcy7g1962 | Lcy-Chr7:46171679 | 3.02E-70 | dispersed | |
Lcy2g0627 | Lcy-Chr2:5376375 | Lcy5g2246 | Lcy-Chr5:45418386 | 6.74E-87 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0627 | K00430 | - | csv:101213178 | 362.073 |