Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0688 | ATGGGCGCCACCATTCTTCCAGATCTCGGGGCTGAGATTTTCATTCCGGTATGTGCTATAGTCGGAATCGTCTTCTCTTTGGTCCAGTGGTATTATGTTTCTCAGGTTAAGCTCTCCCCTGCCCGGGATTCCGCTCACAACAACTCCGCCGCTGCCAAGAATGGCTACTCCGACTACCTCATCGAGGAGGAAGAGGGCGTCAACGACCACAACGTCGTTATCAAGTGTGCCGAAATTCAGAGCGCCATTTCCGAGGGTTCTACGTTAGTCAGCGTCTTGTTTGTTCTGTGGGGAGCAACCTCCTTCCTTTTCACCGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTATTCCTTGGCTCAGTGGAGAGTTTTAGTACCAAGCCTCAAGCATGCACATATGACAAAACAAAGATTTGTAAGCCAGCTTTGGCAACGGCTATATTCAGCACTGTATCATTTTTACTTGGTGCAGTTACCTCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACTACCTTGGAAGCAAGAAAGGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGATGACTGGGGTGGCCTTTTCGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGCGGTGGTATCTACACAAAAGCTGCCGATGTTGGTGCTGACCTCGTAGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCGTCCTGCGCTGCTCTCGTAGTTGCTTCTATCTCTTCTTTCGGCAACAACCATGAGTTGACACCAATGCTCTATCCTCTCATCGTCAGCTCTATGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTAATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGATGTGCAAAACTGGAAACTATTCTTGTGTGTTGCTGTTGGTCTCTGGGCTGGGCTTATAATTGGATTTGTGACGGAGTACTATACGAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTCATTTTTGGGTTGGCATTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGTTAGCATTTTTGTGAGTTTCACCTTCGCTGCAATGTACGGCATTGCAGTTGCTGCCCTTGGAATGCTGAGTACAATAGCTACTGGTTTGGCCATTGATGCGTATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTTTTCGGTGCCTTTGTCAGCCGAGCCGGCGTCACTGCTGTTGACGTCTTGACACCCAAAGTTTTCATTGGTTTGATCGTGGGTGCTATGCTCCCATACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCCACATGTGTCAAGATCTCAACTGATGCTTCCATCAAAGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACGCCCCTAATTGTTGGTATCCTATTCGGAGTCGAAACTCTTTCTGGTGTCCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCGAACACCGGAGGTGCCTGGGATAACGCCAAGAAGTACATTGAGCAAGTTGGTGTTGATGATTATGGACAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCCAAAGGATCAGACCCACACAAAGCCGCGGTGATCGGGGACACAATCGGAGACCCACTCAAGGATACATCAGGACCTTCCCTGAACATTCTGATAAAGTTGATGGCTGTGGAGTCGCTTGTGTTCGCTCCTTTCTTTGCCAGTCACGGAGAGCGTTTTACCTTTTCATCGGTTGATGATGATGATGATGAAGAAGAAAAGAAGATGTCGGTTGAATCTTGTGAAATGAGACACTTGGATGTTATTCTCTTTTTCCCAATTGAGAACAGGCTATTATTGTGA | 2478 | 46.81 | MGATILPDLGAEIFIPVCAIVGIVFSLVQWYYVSQVKLSPARDSAHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQSAISEGSTLVSVLFVLWGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQACTYDKTKICKPALATAIFSTVSFLLGAVTSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSSFTIFNFGTQKDVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTAVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEQVGVDDYGQAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGERFTFSSVDDDDDEEEKKMSVESCEMRHLDVILFFPIENRLLL | 825 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5979234 | 5984022 | - | Maker00021855 | Lcy2g0688 | 625453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0688 | 825 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 11 | 783 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Lcy2g0688 | 825 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 6 | 782 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Lcy2g0688 | 825 | PIRSF | H+-PPtase | 12 | 787 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Lcy2g0688 | 825 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 9 | 779 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Lcy2g0688 | 825 | Pfam | Inorganic H+ pyrophosphatase | 95 | 774 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0688 | Lcy-Chr2:5979234 | Lcy4g1797 | Lcy-Chr4:44010485 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0688 | K23025 | - | csv:101222673 | 1404.81 |