Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0688 ATGGGCGCCACCATTCTTCCAGATCTCGGGGCTGAGATTTTCATTCCGGTATGTGCTATAGTCGGAATCGTCTTCTCTTTGGTCCAGTGGTATTATGTTTCTCAGGTTAAGCTCTCCCCTGCCCGGGATTCCGCTCACAACAACTCCGCCGCTGCCAAGAATGGCTACTCCGACTACCTCATCGAGGAGGAAGAGGGCGTCAACGACCACAACGTCGTTATCAAGTGTGCCGAAATTCAGAGCGCCATTTCCGAGGGTTCTACGTTAGTCAGCGTCTTGTTTGTTCTGTGGGGAGCAACCTCCTTCCTTTTCACCGAGTACAAGTATGTTGGCATCTTTATGGTGTTGTTTGCAGTCTTGATTTTCGTATTCCTTGGCTCAGTGGAGAGTTTTAGTACCAAGCCTCAAGCATGCACATATGACAAAACAAAGATTTGTAAGCCAGCTTTGGCAACGGCTATATTCAGCACTGTATCATTTTTACTTGGTGCAGTTACCTCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACTACCTTGGAAGCAAGAAAGGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCTGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGATGACTGGGGTGGCCTTTTCGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGCGGTGGTATCTACACAAAAGCTGCCGATGTTGGTGCTGACCTCGTAGGCAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCGTCCTGCGCTGCTCTCGTAGTTGCTTCTATCTCTTCTTTCGGCAACAACCATGAGTTGACACCAATGCTCTATCCTCTCATCGTCAGCTCTATGGGTATCCTTGTTTGCCTGATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTAATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGATGTGCAAAACTGGAAACTATTCTTGTGTGTTGCTGTTGGTCTCTGGGCTGGGCTTATAATTGGATTTGTGACGGAGTACTATACGAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTCATTTTTGGGTTGGCATTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGTTAGCATTTTTGTGAGTTTCACCTTCGCTGCAATGTACGGCATTGCAGTTGCTGCCCTTGGAATGCTGAGTACAATAGCTACTGGTTTGGCCATTGATGCGTATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTTGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCTGCTCTTGTGTCCCTTGCCCTTTTCGGTGCCTTTGTCAGCCGAGCCGGCGTCACTGCTGTTGACGTCTTGACACCCAAAGTTTTCATTGGTTTGATCGTGGGTGCTATGCTCCCATACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCCACATGTGTCAAGATCTCAACTGATGCTTCCATCAAAGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACGCCCCTAATTGTTGGTATCCTATTCGGAGTCGAAACTCTTTCTGGTGTCCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCGAACACCGGAGGTGCCTGGGATAACGCCAAGAAGTACATTGAGCAAGTTGGTGTTGATGATTATGGACAGGCTGGTGCCTCTGAGCATGCAAGAACCCTCGGCCCCAAAGGATCAGACCCACACAAAGCCGCGGTGATCGGGGACACAATCGGAGACCCACTCAAGGATACATCAGGACCTTCCCTGAACATTCTGATAAAGTTGATGGCTGTGGAGTCGCTTGTGTTCGCTCCTTTCTTTGCCAGTCACGGAGAGCGTTTTACCTTTTCATCGGTTGATGATGATGATGATGAAGAAGAAAAGAAGATGTCGGTTGAATCTTGTGAAATGAGACACTTGGATGTTATTCTCTTTTTCCCAATTGAGAACAGGCTATTATTGTGA 2478 46.81 MGATILPDLGAEIFIPVCAIVGIVFSLVQWYYVSQVKLSPARDSAHNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQSAISEGSTLVSVLFVLWGATSFLFTEYKYVGIFMVLFAVLIFVFLGSVESFSTKPQACTYDKTKICKPALATAIFSTVSFLLGAVTSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSSFTIFNFGTQKDVQNWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTAVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEQVGVDDYGQAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGERFTFSSVDDDDDEEEKKMSVESCEMRHLDVILFFPIENRLLL 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5979234 5984022 - Maker00021855 Lcy2g0688 625453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0688 825 NCBIfam V-type H(+)-translocating pyrophosphatase 11 783 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy2g0688 825 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 782 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy2g0688 825 PIRSF H+-PPtase 12 787 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy2g0688 825 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 779 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Lcy2g0688 825 Pfam Inorganic H+ pyrophosphatase 95 774 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0688 Lcy-Chr2:5979234 Lcy4g1797 Lcy-Chr4:44010485 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0688 K23025 - csv:101222673 1404.81