Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0710 ATGGAGAAAAGGTGTGGTTGTTGGGCTGTTTTGACTCGTACTGTTTCTGGTGTTTGCAAATCCCCTGCTTCCAAAGACTCTCCCAACACTATTCCTCGAACTAGCCTTGTTTATGATTCTGGTAACCACCATTTCCTTTTCATGTTTGATTTTGTAGTTGTATTTATGGATTCTATCTGGGCTACTGAAACACGGTATTTGAATGCTAGCAACAGAGATCTCTGTACTCTGAACGAAGCCGAGCTAGCCTCCGAGAATGCCAATCCATCATCATCAGATAGCAAAACTACAAGCAAATTGCTTCAGTTCTCTTTTCATGAGCTCAAGGCTGCAACTGGAAACTTTAGACCTGATAGTATTCTTGGGGAAGGTGGATTTGGTTTTGTCTTTAAAGGATGGATTGAAGAGAATGGCACAGCTCCTGCAAAACCCGGATCAGGAATTACAGTAGCTGTTAAGAGCTTGAAACTAGACGGTCTTCAAGGCCACAGAGAATGGGTGGCCGAGGTTGCCTTTCTCGGACAACTTCACCATCCAAATCTTGTTAAGCTTATAGGTTACTGTAACGAAGATGATCAACGTTTGCTTGTTTACGAGTTTATGAGCCGTGGAAGTCTTGAGAACCATCTTTTCAGAAGGACTATACCTCTTCCATGGTCCAATAGGATAAAGATTGCCCTTGGAGCGGCAAAAGGATTGGCCTTTCTTCATAATGGTCCAGTACCTGTTATCTATAGAGATTTTAAGACGTCCAACATCTTGCTTGATTCGGAATACAATGCAAAGCTTTCGGATTTTGGTTTTGCGAAAGCAGGGCCTCAAGGCGACAAAACACATGTTTCTACCAGGGTTATTGGGACATATGGCTATGCTGCTCCTGAATATGTAATGACAGGACATCTGACATCCAAGAATGATGTTTATAGCTTCGGTGTTGTGCTTCTTGAGATTGTAACAGGGAGAAGATCCATGGACAAGAAACGTCCGAGCGGGGAACAGAACCTCGTCTCATGGGCTCGGCCATATTTAGCTGATAAGAGAAAGCTATATCATATAGTGGATCCCCGCTTGGAATTCAACTATTCCATTAAAGGGGTGCAGAAGGTCTCCCAGCTTGCTTGCAGTTGCCTCAGCAGGGATCCGAAACTACGTCCAACCATGGACGAAGTCGTGAAGATTCTGACTCCACTGCAAGATCTCAATGACCTCGCCATCCTAACGTCTCACTGCCGCTCATCTTCACAAGGGAGGCGCAAGAAGAAACCTGAAGGCCTCACCTACTCTCAAAGCTTCAGAGCATCTCCATTGAACACTGGAAAGCAGCATGTAAGGTGA 1335 44.64 MEKRCGCWAVLTRTVSGVCKSPASKDSPNTIPRTSLVYDSGNHHFLFMFDFVVVFMDSIWATETRYLNASNRDLCTLNEAELASENANPSSSDSKTTSKLLQFSFHELKAATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWVAEVAFLGQLHHPNLVKLIGYCNEDDQRLLVYEFMSRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHNGPVPVIYRDFKTSNILLDSEYNAKLSDFGFAKAGPQGDKTHVSTRVIGTYGYAAPEYVMTGHLTSKNDVYSFGVVLLEIVTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYHIVDPRLEFNYSIKGVQKVSQLACSCLSRDPKLRPTMDEVVKILTPLQDLNDLAILTSHCRSSSQGRRKKKPEGLTYSQSFRASPLNTGKQHVR 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6268671 6271515 + Maker00022798 Lcy2g0710 625475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0710 444 MobiDBLite consensus disorder prediction 411 444 - -
Lcy2g0710 444 Gene3D Transferase(Phosphotransferase) domain 1 201 411 - -
Lcy2g0710 444 ProSitePatterns Protein kinases ATP-binding region signature. 121 153 IPR017441 GO:0005524(InterPro)
Lcy2g0710 444 SUPERFAMILY Protein kinase-like (PK-like) 97 406 IPR011009 -
Lcy2g0710 444 Gene3D Phosphorylase Kinase; domain 1 76 200 - -
Lcy2g0710 444 FunFam Probable serine/threonine-protein kinase PBL8 201 414 - -
Lcy2g0710 444 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0710 444 FunFam Serine/threonine-protein kinase BIK1 82 200 - -
Lcy2g0710 444 PANTHER OS01G0588500 PROTEIN-RELATED 89 398 IPR050823 -
Lcy2g0710 444 MobiDBLite consensus disorder prediction 427 444 - -
Lcy2g0710 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0710 444 CDD STKc_IRAK 121 397 - -
Lcy2g0710 444 Pfam Protein tyrosine and serine/threonine kinase 119 394 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0710 Lcy-Chr2:6268671 Lcy7g0253 Lcy-Chr7:2197519 4.94E-174 dispersed
Lcy2g0710 Lcy-Chr2:6268671 Lcy4g2085 Lcy-Chr4:47399149 1.00E-242 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65723 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0710 - - - 0.0