Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0736 AAAATACCTATAAATACACGAACAAAATATATGGATGAAACCCACAAAAAAGCTTTAGATTATTGCAAAGCCAATACGATGGGGCAAACAAAAGGAATGTCGTGGATTCTTCTGGGAATTCTGGCAATGATTTTGCCAGTAAAATCAGAGCTGGCTGTTGGGTTTTATTCAAGGACATGTCCCAAAGCCGAGTCCATCGTAAGGTCCACTGTGGAGTCGTATTTCAAGGCCGATCCCACCATTTCAGCTGGGCTGCTCAGGCTTCACTTCCACGACTGTTTTGTTCAGGGCTGCGATGGTTCGGTATTGATCATGAATGAGAATGCAGAAATAAATGCAGGGCCGAACATGGGGCTAAGAGGGTTTGAAGTGGTTGATGATGCCAAAGCTCAGCTCGAAAATTTGTGCCCTGGTGTTGTTTCTTGTGCGGATATACTTGCTTTGGCTACTCGTGATGCTGTAGACTTGAGTGATGGTCCAAGTTGGTCTGTGCCCACTGGAAGAAGGGATGGAACAGTTTCAATGGCTTTCCAGGCTGAAGATCTTCCTTCTCCATTCGAGCCCATCGATGTCCATATTCAAAAGTTTGCAGAGAAAGGTCTTACAGAAGAAGATCTTGTAACCTTAGTTGGTGCTCACACGATCGGACGAACGGATTGCCAACTATTCAGTTACCGTCTACAGAACTTCACAAGCACAGGGAATCCAGACCCGACGATAAACCCATCGTTCTTGACACAACTGAGAACCCTGTGCCCCTTAGATGGAGATCCGTTCAGAGGAGTGGCAATGGACAAAGACAGCCAGTTGAAATTCGACAACAGCTTCTTCAAGAACTTGATGAATGGGAATGGAGTTTTGGAGTCGGACCAGAGACTTTGGAGCCACCCTTCCACGAGAGGCATTGTGCAGAACTATGCTGGCAGCTTAAGGGGATTGTTGGGCCTCAGATTCAACTATGAGTTCAAGAGAGCCATGGTTAAGCTGAGCAGCATCGATGTCAAGACTGGCACACAAGGGGAGATAAGAAAAAAAATCATCATCAGTTCGTTAGTAATGGAACAAAAAGAAGCCATCTTGTTCGTTCTTTTGGGAATTCTAATGATGGGTTTGCATGTAAATGCTCAGCTGAGAACTGGGTTTTATTCTTTTTCATGTCCAAAAGTGGAGTCTATAGTGAGAGCCACAGTTGAATCGTACTTCAAATCAGATCCTACCATTGCAGCTGGGTTGTTGAGGCTTCATTTTCACGACTGTTTTGTTCAGGGATGTGATGGTTCGGTGTTGATTGCGGGTCCTTTGGCTGAGAGAAATGCTTTGCCGAACCTTGGATTGAGAGGGTTCGAAGTAATAGAAGATGCTAAAGCGCAGCTTGAAGCTGAGTGCCCCGGCGTGGTCTCTTGTGCTGATATTCTTGCTTTGGCCGCTCGAGATGCTGTTGACTTGAGCGAAGGCCCAAGTTGGGCAGTGCCGACGGGAAGAAGGGATGGGAGGATTTCTTCAAAATCTCTAGCCGGAAACTTACCTTCTCCACTTGAGTCCATCGCTGTTCACAAGAAAAAGTTTGCAGAAAAAGGCCTCGACGAAGAAGACCTTGTCACCTTAGTCGGGGCTCACACCATAGGCCAAACAGATTGCCTATTCTTCCGATACCGTCTACACAACTTCACAGCCACAGGCAACTCCGATCCAACCATAAACCCATCGTTCTTGGCGGAGCTGAAAGTGCTGTGCCCTAAAGATGGAGATGCGACCAAGAGGGTGGCGTTGGACAGAGAGAGCCAGTTGAAATTCGACCTCAGTTTCTTCAAGAACATAAGAGATGGAAATGGAGTTTTGGAGTCGGACCAGAGGCTTTGGAACGACGAGTCCACGAGAACCATTGTCCAAAACTATGTGAGCCCTTTAAGAGGACTTTTGGGCCTTAGATTTGACCTTAACTTTAGGAAAGCGATGATCAAGATGAGTAGCATTGAGGTCAAGACTGGTTCGCAAGGAGAGATTAGGAGAAAATGTTCTAGGTTTAATTAG 2031 46.18 KIPINTRTKYMDETHKKALDYCKANTMGQTKGMSWILLGILAMILPVKSELAVGFYSRTCPKAESIVRSTVESYFKADPTISAGLLRLHFHDCFVQGCDGSVLIMNENAEINAGPNMGLRGFEVVDDAKAQLENLCPGVVSCADILALATRDAVDLSDGPSWSVPTGRRDGTVSMAFQAEDLPSPFEPIDVHIQKFAEKGLTEEDLVTLVGAHTIGRTDCQLFSYRLQNFTSTGNPDPTINPSFLTQLRTLCPLDGDPFRGVAMDKDSQLKFDNSFFKNLMNGNGVLESDQRLWSHPSTRGIVQNYAGSLRGLLGLRFNYEFKRAMVKLSSIDVKTGTQGEIRKKIIISSLVMEQKEAILFVLLGILMMGLHVNAQLRTGFYSFSCPKVESIVRATVESYFKSDPTIAAGLLRLHFHDCFVQGCDGSVLIAGPLAERNALPNLGLRGFEVIEDAKAQLEAECPGVVSCADILALAARDAVDLSEGPSWAVPTGRRDGRISSKSLAGNLPSPLESIAVHKKKFAEKGLDEEDLVTLVGAHTIGQTDCLFFRYRLHNFTATGNSDPTINPSFLAELKVLCPKDGDATKRVALDRESQLKFDLSFFKNIRDGNGVLESDQRLWNDESTRTIVQNYVSPLRGLLGLRFDLNFRKAMIKMSSIEVKTGSQGEIRRKCSRFN 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6515072 6523194 + Maker00022403 Lcy2g0736 625501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0736 676 ProSiteProfiles Plant heme peroxidase family profile. 50 344 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Lcy2g0736 676 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Haem peroxidase superfamily signature 82 96 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 ProSitePatterns Peroxidases proximal heme-ligand signature. 531 541 IPR019793 -
Lcy2g0736 676 ProSiteProfiles Plant heme peroxidase family profile. 376 676 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 FunFam Peroxidase 54 192 - -
Lcy2g0736 676 SUPERFAMILY Heme-dependent peroxidases 376 676 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 FunFam Peroxidase 183 329 - -
Lcy2g0736 676 SUPERFAMILY Heme-dependent peroxidases 51 345 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 FunFam Peroxidase 509 655 - -
Lcy2g0736 676 ProSitePatterns Peroxidases active site signature. 82 93 IPR019794 GO:0004601(InterPro)
Lcy2g0736 676 CDD secretory_peroxidase 376 675 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy2g0736 676 FunFam Peroxidase 380 522 - -
Lcy2g0736 676 Gene3D Peroxidase, domain 2 509 655 - -
Lcy2g0736 676 Gene3D Peroxidase, domain 2 183 329 - -
Lcy2g0736 676 Pfam Peroxidase 393 633 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 Pfam Peroxidase 67 308 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 CDD secretory_peroxidase 50 345 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy2g0736 676 Gene3D - 380 676 - -
Lcy2g0736 676 Gene3D - 54 345 - -
Lcy2g0736 676 PANTHER PEROXIDASE 25-RELATED 371 672 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 60 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 84 104 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy2g0736 676 ProSitePatterns Peroxidases active site signature. 408 419 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0736 Lcy-Chr2:6515072 Lcy8g2145 Lcy-Chr8:47595930 8.26E-154 dispersed
Lcy2g0736 Lcy-Chr2:6515072 Lcy4g0570 Lcy-Chr4:6967612 2.54E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0736 K00430 - csv:101214998 570.466