Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0761 ATGGAGGATAAGAAAGCCAACATAGTTTTTCTTTTGTTAATCGTCACCCTCATCCTCATCGTCATTCTTGCTCGAGTTTACCTCAAACTTACCAACGCTTTCTTTCTTATTTGCGGGATCGATGTGTCTCTCATCTCCGCTATCTTGGTCTATATGGTAATCAGAATGCGATTCAACCGGAGAAGAAAACAGCTCCAGTCTCAGTTAAGTTCCGAAGGTCGAGAGCTTCGGATCGAGTACAGTTTCTTAAGGAAGGTCGCCGGAGTTCCCACGAAGTTCCGCTACAATGAGCTCGAGGAAGCCACCGACTATTTCATGTCCTTGATCGGTCAAGGATCCTCCGGTTCGGTCTTCAAAGGAATCCTCAAAGACGGCACTGCCGTCGCCGTCAAGCGGATCGAGGGCGAAAATCGCGGGGAAAAAGAGTTCCGAGCCGAGGTATCCGCCATTGCTAGTGTTCAGCATGTTAATCTCGTTCGTCTACTTGGCTACTGTACCAATTCATCTGGACCTCGATTTCTCGTCTACGAATTCGTTCCCAACGGATCCTTGGATTGCTGGATTTTCCCCAAAAAACCTAGGCACAAGAATCGAAATCGCCCTGGCGGTTGCTTGGCTTGGGATCTGAGATACAGAGTCGCGATTGATGTCGCCAGAGCCCTAGCGTACCTTCACCACGATTGCCGATCGAGAATCTTACACCTCGATGTGAAGCCAGAAAACATCCTGCTCGACGAAAATTACAAAGCAATCGTATCGGATTTCGGACTGTCGAAGCTGATGGGGAAAGACGAGAGCCGAATAATGACGTCGATGAGAGGGACGAAGGGGTATTTGGCTCCGGAATGGCTGTTGGAGAACGGAATTTCAGAGAAATCGGACATATACAGCTATGGAATGGTTCTTCTGGAACTAGTCGGAGGGCAGAGGAACGTGAGCGTAGTTGAAAATGGCGATGACAAATCTAAGAAAAAATGGCAGTATTTTCCACGAATCGTGAGTGCGAAACTCAGGGAAGGGAAATTAATGGAAGCTGTGGATCAAAGACTCTTGGAAACGGGAACGATCGACGAGAGAGAGGTACGGAAACTGGTTTGTGTGGGTTTGTGGTGCATACAAGAGAACGCGAAGCTGAGGCCGACGATGGCGACGGTGGTGGATATGCTCGAAGGCCGCGTGGCGGTGGAGGAGCCGCCGGACACTCAAATGCTCGTCGTTGATTTGTTGTCGATTGACGAAGAGATGATGAATAGCCATGAGAGGCCGAAGATCGTTGCATTGGGGGAACGGATGAACGACGGCAACGTTCCATCGTCGTCGACAACTTACTCCTACGCCTTTTCGGTACTCTCCCCCCGGTGA 1362 49.71 MEDKKANIVFLLLIVTLILIVILARVYLKLTNAFFLICGIDVSLISAILVYMVIRMRFNRRRKQLQSQLSSEGRELRIEYSFLRKVAGVPTKFRYNELEEATDYFMSLIGQGSSGSVFKGILKDGTAVAVKRIEGENRGEKEFRAEVSAIASVQHVNLVRLLGYCTNSSGPRFLVYEFVPNGSLDCWIFPKKPRHKNRNRPGGCLAWDLRYRVAIDVARALAYLHHDCRSRILHLDVKPENILLDENYKAIVSDFGLSKLMGKDESRIMTSMRGTKGYLAPEWLLENGISEKSDIYSYGMVLLELVGGQRNVSVVENGDDKSKKKWQYFPRIVSAKLREGKLMEAVDQRLLETGTIDEREVRKLVCVGLWCIQENAKLRPTMATVVDMLEGRVAVEEPPDTQMLVVDLLSIDEEMMNSHERPKIVALGERMNDGNVPSSSTTYSYAFSVLSPR 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6723046 6724407 - Maker00022742 Lcy2g0761 625526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0761 453 Gene3D Phosphorylase Kinase; domain 1 65 178 - -
Lcy2g0761 453 FunFam Putative receptor-like protein kinase 179 397 - -
Lcy2g0761 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0761 453 SMART serkin_6 103 389 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0761 453 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0761 453 CDD STKc_IRAK 109 391 - -
Lcy2g0761 453 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 52 415 - -
Lcy2g0761 453 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524(InterPro)
Lcy2g0761 453 SUPERFAMILY Protein kinase-like (PK-like) 86 390 IPR011009 -
Lcy2g0761 453 Pfam Protein kinase domain 107 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0761 453 FunFam Putative receptor-like protein kinase 70 178 - -
Lcy2g0761 453 Gene3D Transferase(Phosphotransferase) domain 1 179 404 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0761 Lcy-Chr2:6723046 Lcy9g1839 Lcy-Chr9:43471196 6.37E-92 dispersed
Lcy2g0761 Lcy-Chr2:6723046 Lcy13g1792 Lcy-Chr13:36900486 4.74E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65726 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0761 - - - 0.0