Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g0764 | ATGAAGGAGAATCCAGCGCCGGCGCCTGCGCCGTTAGAATCAGTTAAAGTTCCAGTGCTGTGCGCCGTGGTGGTGATTTTATGTGCAAAAATGGCGGTGGCGCTATGGTGGAAGCCGCGAAGAATCGAAGAGCACTTTCTGAGACAAGGAATTCGAGGCCCTCCTTATCGTTTCTTCATCGGTAACTTCAAAGAACTCGTCTCTATGATGCTCGCCGCTTCTTCCCATCCAATGCCCAATTTCTCCCACAATATTCTCCCCCGTGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTACGGTTCGACATTTCTGATCTGGTTCGGACCCATGGTTCGAGTGGCGGTGTCGGACCCGGACATGATCCGAGAAATCTTGACCACCAACTCCGAATTCTACGAGAAGAACGAAGCTCATCCTCTCGTCAAACAGCTCGAAGGGGACGGCCTCCTCACCCTCAAGGATCAAAAATGGGCTCTCCATCGCAAAATCATCTCCCCCACTTTTCACATGGAGAATCTCAAATTGCTGATTCCGGTGGTGGAGGAAAGTGTGGTGGATATGGTCGAGAAATGGTCGGCCACGGCGGACGACACGGCCTCCGGCGAGGTCGAGATCGAAGTTTTCGATTGCTTCCAAACCCTAACGGAAGATGTCATCACGAAAACAGCATTCGGGAGTAGCTATGAAGATGGAAAAGCCATTTTCAAGCTTCAAACCCAACAAATGATATTAGCATCCGAAGCTTTTCAGAAGGTCTTCATTCCTGGCTATAGATTTCTACCGACAAGAACGAATATTAGTTCGTGGAAATTGGACAAGGAAATAAAGAAATCGTTGATGAAATTGATCGAGGGTCGAAAAGGAAATTCAGAGAAAAATTGGGCAATGGATGAAAAAGGACCAAAAGATTTATTAGGGCTGATGATTCAAGCTTCCAACTCATCTTCTTGTTCTTCATTAAACAATAATATTACCGTCCACGACATCGTTGAAGAGTGCAAAAGCTTCTTCTTTGCTGGCAAACAGACCACTTCCAATCTGCTGACGTGGACTACTGTCTTGCTGGCAATGCATCCACAGTGGCAAATCCAGGCACGTGACGAGGTCCTTAGCGTGTGCGGTCCACGTGCCCTCCCCTCCAGAGATGATGTTTCTAAGTTGAAGATCTTGAGCATGATACTAAACGAGTCCTTACGATTGTACCCGCCCACGGTGGCTACCATTAGACGTGCAAAGGAAGACGTGGAGCTAGGAGGGCGGATGATCCCACGTGGGACGGAGTTTTTGATTCCAATTCTGGCCGTCCATCATGATCAAAGTATTTGGGGGAATGATGCGAGTGAGTTTAATCCAGGGCGATTTTCAGAAGGGGTGGGTCGTGCGGGAAATCATCCAGCGGGGTTTATTCCGTTTGGACTTGGTGTTCGTACTTGCATTGGCCAAAACTTGGCCCTTTTACAAGCAAAGTTGGCAATGACAATCATACTTCAACGATTCTCATTTCGATTGGCTCCCACCTATCAGCATGCACCAACGGTCTTGATGCTTCTTTATCCACAATATGGGGCCCCCATTATTTTTCAAAAGATATCCCAATTCACAGGCGATGCTTCCATGCCATAG | 1626 | 47.6 | MKENPAPAPAPLESVKVPVLCAVVVILCAKMAVALWWKPRRIEEHFLRQGIRGPPYRFFIGNFKELVSMMLAASSHPMPNFSHNILPRVLSFYHHWKKIYGSTFLIWFGPMVRVAVSDPDMIREILTTNSEFYEKNEAHPLVKQLEGDGLLTLKDQKWALHRKIISPTFHMENLKLLIPVVEESVVDMVEKWSATADDTASGEVEIEVFDCFQTLTEDVITKTAFGSSYEDGKAIFKLQTQQMILASEAFQKVFIPGYRFLPTRTNISSWKLDKEIKKSLMKLIEGRKGNSEKNWAMDEKGPKDLLGLMIQASNSSSCSSLNNNITVHDIVEECKSFFFAGKQTTSNLLTWTTVLLAMHPQWQIQARDEVLSVCGPRALPSRDDVSKLKILSMILNESLRLYPPTVATIRRAKEDVELGGRMIPRGTEFLIPILAVHHDQSIWGNDASEFNPGRFSEGVGRAGNHPAGFIPFGLGVRTCIGQNLALLQAKLAMTIILQRFSFRLAPTYQHAPTVLMLLYPQYGAPIIFQKISQFTGDASMP | 541 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 6760202 | 6762861 | - | Maker00022021 | Lcy2g0764 | 625529 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g0764 | 541 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 21 | 523 | IPR050665 | GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER) | |
| Lcy2g0764 | 541 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 472 | 481 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy2g0764 | 541 | Pfam | Cytochrome P450 | 90 | 510 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | SUPERFAMILY | Cytochrome P450 | 83 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | FunFam | Cytochrome P450 734A1 | 36 | 532 | - | - | |
| Lcy2g0764 | 541 | CDD | CYP734 | 90 | 525 | - | - | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 97 | 116 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 469 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 479 | 502 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | P450 superfamily signature | 340 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | P450 superfamily signature | 470 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | P450 superfamily signature | 393 | 404 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | PRINTS | P450 superfamily signature | 479 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0764 | 541 | Gene3D | Cytochrome P450 | 36 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g0764 | Lcy-Chr2:6760202 | Lcy9g2180 | Lcy-Chr9:46464919 | 7.43E-147 | dispersed | |
| Lcy2g0764 | Lcy-Chr2:6760202 | Lcy4g2132 | Lcy-Chr4:47847776 | 6.72E-284 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy2g0764 | K15639 | - | csv:101213466 | 900.582 |