Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0786 ATGGGGACGGGGACGGGGTGGGGATACCATCCCCATCCCCGCCCCGTCCCCGATCGGGGACCCGAAAAGGATCCCCGGGTTGACCCCCCATACCCGATCAAACTGGGGATTCCCCGCCCCGTTAGGGGCGGGGCCACACGGAGACCCGACCCCGCGGGGATTTTTGCCATCCCTACCAATGACCACAAGCTCCCTTCCTCTTCTCCTTCGTCACTCTCACTCTCTATTTTACCCAAATCTTCATCGTTTCTCTCCTTTTCTTTAATGGGTCATCGCCGGAATCCTGGTTTTGTCTCACCCCACCGTCACGAACCGCCACTCGAAACCATTTTTTACTTTTCAAGCCGCCTCCCCATTTCTCTAATTTCACTTCCCCTTCTCCTCCTTCTTCTTCTTCATTCTGTTCGATCGGAGCCCTCCGCCGACAAGGCAGCGCTTCTCGATTTCTTGAACAGAACCCCCCATGAGAATCGCCTTCAATGGAATGCTTCCGCCTCTGCTTGTACTTGGGTTGGAGTTGTCTGTGATGACAGTAAGTCGTTTGTTTTTGCTCTCCGGTTGCCTGGTGTTGGACTTGTCGGCCCGATTCCGGCCAATACTCTCGGCCGGTTGAATCGGCTCCGAGTTATGAGTCTCCGGTCTAATAGACTCTCTGGGAGTTTGCCTGCGGATTTTTCCAATTTGACATTTCTTCGGAGTCTTTATCTTCAGGACAACGAGCTTTCCGGTGAGTTTCCGGTGAGTGTGACTCAGTTGACTCGGTTGACTCGTCTCGACCTCTCGTCCAACAATTTCTCTGGTTCGATTCCGTTTTCGGTCAATAATTTGACCCATTTGAGTGGGCTTTTTCTGGAGAATAATGAGTTTTCGGGTTCTTTGCCGAGTATTCCCGCGATTAATTTGACGAGCTTCAATGTCTCGAATAATCAGCTCAATGGATCCATTCCCGAAACCTTATCGAAATTCTCTGCTGCATCTTTCGCTGGAAATTTAGCGCTCTGCGGTGGTCCGTTGCCGTCGTGCAACCCGTTTTTTCCGTCCCCTGCTCCGTCGCCGACGTCCGCCGTGAAACCCCCACAAATTCCCGTCGAGAAGAAGTCGAAAAAGCTCTCCATCGCCGCCATTGTCGGAATTGTAGTCGGCGCTGCTTTCGTTGCGTTTCTACTGCTGTTTTTGCTCCTATTTTGCCTCCGGAAGCGCGAGCGTCGGCAACCGGCGAAGCCGCCGAGTACGGTGGTTACTGCTCGATCTGTGCCGGCGGAGGCGGGCACATCGTCTTCGAAAGACGACATCACCGGCGGATCGGTGGAGGCGGAGAAAAACAGATTAGTGTTCTTCGAAGGTGGGGTTTACAGCTTCGATTTGGAGGACCTGTTGAGGGCTTCGGCGGAGGTTCTGGGAAAAGGAAGCGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTCGTCGTTAAGAGATTGAAAGATGTCGTAATGACGAAGAAGGAATTCGAAACGCAAATGGAATCTCTGGGAAGCGTGAAACATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTTTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCCGCTTCACTTCACGGTAGTAGAGGATCTGGCCGTACGCCACTTGACTGGGACAACCGGATGAAAATCGCATTAAACGCAGCAAGAGGACTGGCTCACCTCCACGTGTCGGGAAAACTCGTCCACGGCAACATCAAATCGTCGAACATCCTCCTCCGCCCCAACCACGACGCCGCCGTCTCCGACTTCGGCCTGAACCCTCTCTTCGGCGCCTCGACGCCGCCGAATCGGATCGCCGGATACCGCGCGCCGGAGGTGGTTGAAACCCGGAAGGTTACCTTCAAATCCGACGTGTACAGTTTTGGCGTGTTGCTATTGGAGCTTTTGACCGGGAAATCGCCGAATCAGGCGTCGTTGGGTGAAGAAGGGATCGATCTTCCGCGGTGGGTCCAGTCGGTGGTCCGAGAGGAATGGACGGCGGAGGTTTTTGATGTGGAATTGATGAGGTACCACAATATCGAAGAAGAAATGGTTCAGTTGTTACAAATTGCGATGGCTTGTGTCGCCACCGTGCCGGACCAGCGGCCGTCGATGCAGGAGGTGGTTCGCATGATTGAGGATTTGAACCGGGTGGAGACCGACGACGGGTTACGACCGTCGTCCGATGACCCCTCGAAAGGATCGGAGGGCCAAACCCCGCCGCAGGAGTCCAGAACCACCCCTCCCGGAGCGGCCGGACCACCGTAG 2307 54.44 MGTGTGWGYHPHPRPVPDRGPEKDPRVDPPYPIKLGIPRPVRGGATRRPDPAGIFAIPTNDHKLPSSSPSSLSLSILPKSSSFLSFSLMGHRRNPGFVSPHRHEPPLETIFYFSSRLPISLISLPLLLLLLLHSVRSEPSADKAALLDFLNRTPHENRLQWNASASACTWVGVVCDDSKSFVFALRLPGVGLVGPIPANTLGRLNRLRVMSLRSNRLSGSLPADFSNLTFLRSLYLQDNELSGEFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTHLSGLFLENNEFSGSLPSIPAINLTSFNVSNNQLNGSIPETLSKFSAASFAGNLALCGGPLPSCNPFFPSPAPSPTSAVKPPQIPVEKKSKKLSIAAIVGIVVGAAFVAFLLLFLLLFCLRKRERRQPAKPPSTVVTARSVPAEAGTSSSKDDITGGSVEAEKNRLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKKEFETQMESLGSVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSASLHGSRGSGRTPLDWDNRMKIALNAARGLAHLHVSGKLVHGNIKSSNILLRPNHDAAVSDFGLNPLFGASTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEDLNRVETDDGLRPSSDDPSKGSEGQTPPQESRTTPPGAAGPP 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6971897 6977132 - Maker00022580 Lcy2g0786 625551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0786 768 MobiDBLite consensus disorder prediction 406 433 - -
Lcy2g0786 768 MobiDBLite consensus disorder prediction 1 48 - -
Lcy2g0786 768 Gene3D Phosphorylase Kinase; domain 1 428 534 - -
Lcy2g0786 768 MobiDBLite consensus disorder prediction 417 432 - -
Lcy2g0786 768 Gene3D Ribonuclease Inhibitor 140 298 IPR032675 -
Lcy2g0786 768 MobiDBLite consensus disorder prediction 727 742 - -
Lcy2g0786 768 Gene3D Transferase(Phosphotransferase) domain 1 535 741 - -
Lcy2g0786 768 Pfam Protein tyrosine and serine/threonine kinase 464 724 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0786 768 MobiDBLite consensus disorder prediction 727 768 - -
Lcy2g0786 768 MobiDBLite consensus disorder prediction 15 29 - -
Lcy2g0786 768 MobiDBLite consensus disorder prediction 744 759 - -
Lcy2g0786 768 CDD STKc_IRAK 466 728 - -
Lcy2g0786 768 Gene3D Ribonuclease Inhibitor 299 344 IPR032675 -
Lcy2g0786 768 ProSiteProfiles Protein kinase domain profile. 460 728 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0786 768 Pfam Leucine Rich Repeat 206 228 IPR001611 GO:0005515(InterPro)
Lcy2g0786 768 Pfam Leucine Rich Repeat 300 321 IPR001611 GO:0005515(InterPro)
Lcy2g0786 768 Pfam Leucine Rich Repeat 254 276 IPR001611 GO:0005515(InterPro)
Lcy2g0786 768 Pfam Leucine Rich Repeat 231 251 IPR001611 GO:0005515(InterPro)
Lcy2g0786 768 Pfam Leucine rich repeat N-terminal domain 140 176 IPR013210 -
Lcy2g0786 768 PANTHER OS05G0588300 PROTEIN 123 735 IPR050994 -
Lcy2g0786 768 SUPERFAMILY L domain-like 156 322 - -
Lcy2g0786 768 SUPERFAMILY Protein kinase-like (PK-like) 464 725 IPR011009 -
Lcy2g0786 768 FunFam pollen receptor-like kinase 1 430 534 - -
Lcy2g0786 768 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 535 737 - -
Lcy2g0786 768 FunFam Probable inactive receptor kinase RLK902 139 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0786 Lcy-Chr2:6971897 Lcy8g1684 Lcy-Chr8:43400948 3.63E-161 dispersed
Lcy2g0786 Lcy-Chr2:6971897 Lcy4g2143 Lcy-Chr4:47944602 1.94E-281 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65727 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0786 - - - 0.0