Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0804 ATGAATCCCAACTCCAATTTCATTTTCTTCTTCAACCTCATCCTCCTCCTCCGCCTCGCCGCCGCCCTCCCCACCGTCGGCCATGGCGCCCTCTCCGACGCCGAAGCTCTCTACATCCGCCACCGTCAGCTTCTCTACTACAGAGACGAGTTCGGCGACCGTGGCGAGCATGTCACCGTCGACCCATCTCTCGGCTTCGAAAATGAAAGGATCAGAAACGCCTACATTGCCCTTCAGGCTTGGAAACTCGCCATTTTGTCCGACCCTCTGAATCAAACCGCCAATTGGGTCGGATCTGACGTCTGCAGCTACACCGGCGTCTACTGTGCTCCCGCATTGGACAACCCCAAGATCCGCACCGTCGCCGGAATCGATCTCAACCACGGCGACATTGCCGGATACCTTCCCGAAGAGCTCGGTTTACTTGCGGATCTTGCATTGTTCCACATCAACTCCAACAGATTCTGCGGCACTGTACCTCACAAATTTGACCGTCTCAAGCTGCTTTACGAATTGGATCTCAGTAATAATCGGTTCGCCGGGAAGTTTCCTGACGTCGTTCTCAAGCTTCCGACGCTCAAGTTCTTGGATCTGCGGTTCAACGAATTTGAAGGCAATGTGCCCAGAGAGCTGTTTGATAAAGATTTGGACGCGATTTTTATTAACCACAACAGGTTCAGATTCGAACTGCCGGATAATTTCGGGAACTCGCCGGTGTCGGTGATTGTGCTTGCGAATAACAAGTTCCATGGGTGTTTGCCTGCGAGCTTGGGCAACATGACGAGGCTGAATGAGATCATTATGATGAACAATGGGCTTAATTCCTGTTTGCCGCCGGAAATTGGAGCGTTGAAGAACTTGACGGTGTTCGATGTTAGTTTCAATGAGTTGGTGGGTCCGTTGCCGGAGACTTTTGGAGGGCTTGTGAGTTTGGAGCAACTCAATGTGGCTAGTAATTTTCTCTCTGGGAAGATTCCGGAGAGTATTTGTGAGTTGCCTAAGCTTCAAAATTTCACGTTCTCGAATAACTTCTTTACCGGGGAGCCGCCGGCTTGTTTGAGTGTTCGGGATTTCAGTGATCGGAGGAATTGCTTGCCCGGACGACCGGCGCAGCGCCCGAGTGGGCAATGCAAGTCGTTCTTGTCGAAGCCTGTTGATTGTAATGCGTTTAAATGCGGTGGTTCTTCTTCTGGTTCCCCTTCTTCTCCCTTCACTCCTCCGGTGGTTTCACCCACTTCGCCGCCATCGCCGTCTCAGTCCCCGAATACACCGCCGGCACCGCCATTGTCGCCCCATTTTCCGCCGTCGCCGCCTTCTTCCCCATCTACGCCATCTACGCCATCGCAGCCGTCAGCACCACCACTGATTTCTTCTCCGCCGTCGCCTTCATCTCCAACTACACCTACAACCCCTTCATCGCCGCCCCATTTTCCCTCTCCCTCGGCGCCGTCGCCTTCATCTCCACCTCAAGGCCATGCTCCGCCGTCATTACCCTCACCTTCATCGCCGCCACAAGGTCATACTCCGCCGGCATTAGCTCCACCGTCTGAGCCCTCACCAACATCGCCGCCACAAGGCCATACTCCGTCATCTCCACCTTCGCCGTCCGAGCCAACACCATCATCGCCGCCTCAAGGCCATACTCCGCCGGCTCCACCTTCACCGACCAAGCCTTCGCCATCATCGCCGCCTCAAGGTCACACTCCGGGGGCTCCTCCTTCGCCGTCCGAGCCCTCACCTTCATTGCCGCCTCAAGGCCATACTCCGCCGGCTCCAACTTCACCGACCGAGCCCTCGCCATCATCGCCGCCGCAAGGCCACACTCCAGGGTCACCTCCCTCGCCGTCCGAGCCCTCACCTTCATCGCCGCCTGAAGGCCACATTCCGCCGGCTGAGCCTTCTCCACCTGTAACATCATCACCACCAGCACCGCCATTACCAGTCTACACTCCGCCTCCGCCACATTTCCCTGATTTCCCTTCGCCACCATCTTCACAACCTCCAGTGTACTGCCCTCGAACCCCATATCCACCATCTCCTCCATCCTACTCCCCAACCCCACCTCTCACTCACCCCTCCTCCCCTCCGCCGCCGCTACCTGTTTATTCTCCGCCTCCCCCTGTCTATACATCGCCGTCGCCACTCCCTCTCCCTTGCATACAACCTCCACCGCCTCCCCCACCAGATGTTCAATATTCAGAACCACCTCCTCCACCGCCGCCAACACAACCTTCTCCAATTCACTATAATTCCCCACCACCGCCCGTCCATTACCAATCTCCACCCTCACCTTCACCGCCTCCGGTTAGTGTGTATCCGCCGCCGTCTCCATCGCCCCCACCTCCGGTGGTCTATGAAAGCCCGCCGCCGCCTGTTGTCTACCAAAGCCCACCTCCGCCTCCAACTCCGGCATACGGTGGCCCACTGCCACCAATTTACGGGGTTCCCTACGCCTCTCCTCCGCCACCGCCCTTCTATTAA 2481 56.79 MNPNSNFIFFFNLILLLRLAAALPTVGHGALSDAEALYIRHRQLLYYRDEFGDRGEHVTVDPSLGFENERIRNAYIALQAWKLAILSDPLNQTANWVGSDVCSYTGVYCAPALDNPKIRTVAGIDLNHGDIAGYLPEELGLLADLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGKFPDVVLKLPTLKFLDLRFNEFEGNVPRELFDKDLDAIFINHNRFRFELPDNFGNSPVSVIVLANNKFHGCLPASLGNMTRLNEIIMMNNGLNSCLPPEIGALKNLTVFDVSFNELVGPLPETFGGLVSLEQLNVASNFLSGKIPESICELPKLQNFTFSNNFFTGEPPACLSVRDFSDRRNCLPGRPAQRPSGQCKSFLSKPVDCNAFKCGGSSSGSPSSPFTPPVVSPTSPPSPSQSPNTPPAPPLSPHFPPSPPSSPSTPSTPSQPSAPPLISSPPSPSSPTTPTTPSSPPHFPSPSAPSPSSPPQGHAPPSLPSPSSPPQGHTPPALAPPSEPSPTSPPQGHTPSSPPSPSEPTPSSPPQGHTPPAPPSPTKPSPSSPPQGHTPGAPPSPSEPSPSLPPQGHTPPAPTSPTEPSPSSPPQGHTPGSPPSPSEPSPSSPPEGHIPPAEPSPPVTSSPPAPPLPVYTPPPPHFPDFPSPPSSQPPVYCPRTPYPPSPPSYSPTPPLTHPSSPPPPLPVYSPPPPVYTSPSPLPLPCIQPPPPPPPDVQYSEPPPPPPPTQPSPIHYNSPPPPVHYQSPPSPSPPPVSVYPPPSPSPPPPVVYESPPPPVVYQSPPPPPTPAYGGPLPPIYGVPYASPPPPPFY 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7206896 7209376 - Maker00022058 Lcy2g0804 625569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0804 826 Pfam Leucine rich repeat N-terminal domain 77 109 IPR013210 -
Lcy2g0804 826 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 535 IPR051582 -
Lcy2g0804 826 FunFam Leucine-rich repeat extensin-like protein 5 237 376 - -
Lcy2g0804 826 Pfam Leucine Rich Repeat 169 187 IPR001611 GO:0005515(InterPro)
Lcy2g0804 826 Gene3D Ribonuclease Inhibitor 74 236 IPR032675 -
Lcy2g0804 826 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Lcy2g0804 826 MobiDBLite consensus disorder prediction 395 813 - -
Lcy2g0804 826 Pfam Leucine rich repeat 286 343 IPR001611 GO:0005515(InterPro)
Lcy2g0804 826 Gene3D Ribonuclease Inhibitor 237 364 IPR032675 -
Lcy2g0804 826 SUPERFAMILY L domain-like 83 352 - -
Lcy2g0804 826 MobiDBLite consensus disorder prediction 404 813 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0804 Lcy-Chr2:7206896 Lcy9g2147 Lcy-Chr9:46089140 8.31E-43 dispersed
Lcy2g0804 Lcy-Chr2:7206896 Lcy4g2157 Lcy-Chr4:48125563 2.06E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0804 - - - 0.0