Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0805 ATGGGTTCGTTCAAAAGTGATCAAAAAGTGAGCTTTGCCGATCCGAGGCCATTCGGGAAGAAGCTGAAATCGGATCTGAAAGAGACGTTTTTCCCCGACGATCCGTTCAGACAGTTTCAAGATGACAGGGCACTGCACCGAGTGAAAAAGGGCGTCCAATATTTCATCCCCATATTGGATTGGCTTCCCAAATACAACTTTAATATGTTTAAGTACGATTTGCTTGCTGGTATTACCATTACCAGCCTCGCCATCCCCCAAGGCATCAGCTACGCCAAGCTCGGCAGCCTCCCTCCCATCATCGGCCTCTATTCGAGCTTCGTCCCGCCGCTTGTGTACGCGGTGTTTGGGAGCTCGAAGCATCTGGCGGTGGGGACGGTGGCGGCGTGTTCGTTGCTGATAGCTGATATCATCGGAGCCGTGGCGTCGCCGGAGAAAGAACCCACATTGTATCTCCACTTGGTTTACACTGCCACCTTCATCACCGGCGTGTTTCAGGCCGCTTTAGGCTTTTTAAGATTGGGAATTTTGGTGGATTTCTTATCGCATTCGACAATCCTTGGGTTCATGGGAGGGACGGCCGTGATCATTTGCCTTCAACAACTCAAAGGCATATTTGGACTCACTCATTTCACTAGCAAAACCGACGTCGTTTCGGTACTCCATGCGGTGATCAGCCTTAGATATGAGTGGAAATGGCAAAGTGCAGTGGTGGGCGTCATCTTCCTAATTTTTCTCCAGTTTACTAGGTTCCTGAGAAACAGAAACCCGAAGCTATTTTGGGTGTCAGCGATGGCTCCAATGGTGACAGTGATAATCGGATGCTTGTTTGCGTATTTCATCAAAGGAGAAAAACATGGAATCTTAACTGCTGTTTGGGATGTGGGAATAGATTGGGTTGGAATGGAATCACATGTGATACCCATGTTTGGTGCGCCGGATTTGAGTGGGGTTGGAATGGAATTATGGACATGTGGATTCCAACCCAATTCCCACATTTTGGTGGGTCACTTGAGCAAAGGAATAAACCCTATTTCTATTAAATTCTTGAACTTTGACTCAAAATATATATCAGCTGTACTACAAGCTGGCTTGATCACTGGCATGGTGGCTTTGGCTGAAGGAATAGCCATTGGTCGAAGCTTTGCAATAATGAAAAACGAACAAATCGATGGCAACAAAGAGATGGTAGCCTTTGGTTTGATGAACATCGTGGGATCTTTCACTTCTTGCTACTTAACCACTGGGCCATTCTCAAAGACTGCAGTGAACTTCAATGCTGGATGTAGAACAGCAATGTCGAACATAGTAATGGCAGTCTTCATGGCTCTCACCCTCCTTTTTCTAGCTCCTCTTTTCAGCTACACTCCTCTCGTAGCCCTTTCCGCCATTATCATGTCCGCCATGCTTGGTCTGATCAAATATGAAGAAATGTACCATATTTTCATTGTTGACAAGTTCGATTTCTGCATTTGTATGGCGGCTTTCTTGGGCGTTGCTCTGCTGAGCATGGATGTTGGCATCATGCTTTCGGTGGGTCTTGCTTTGCTGAGAGCTCTTCTATACATGGCTAGACCAGCAACTTGCAAGCTTGGGAAAATACCAAACTCCGCTTTGTACAGAGACATGGAGCAGTACCCTGATTCAAACAGAGTCCCTGGAATTATTGTTCTTCAACTTGGTTCTCCTGTCTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTCAGATGGATTCGTGATGAGCAGGCCATGTTTGGTTCCATAGATGGATCAGTCCAACACGTACTGCTCGAATTGAGTGGAGTCACATCAATCGACATGACAGGGATTGAAACTCTAGTCGAAATCCGCAGATCGTTACAAGCAATGGGAATTCAGATGGGAATCGTAAACCCAAGAATCGTAGTGATGGAGAAGATGATAGCATCGGAATTCACAGACACGATCGGGAAAGAAAACATCTATTTGTCGGTGGACGATGGAGTGGAAAGGTGCAGAGATACGGTTGTGAAGCCAAAGAAAACAGATGCAAGTGAACGAAGCTCCGATGTGACGACAATGGAGCAGCGGGTATAA 2082 46.21 MGSFKSDQKVSFADPRPFGKKLKSDLKETFFPDDPFRQFQDDRALHRVKKGVQYFIPILDWLPKYNFNMFKYDLLAGITITSLAIPQGISYAKLGSLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADIIGAVASPEKEPTLYLHLVYTATFITGVFQAALGFLRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVVSVLHAVISLRYEWKWQSAVVGVIFLIFLQFTRFLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIKGEKHGILTAVWDVGIDWVGMESHVIPMFGAPDLSGVGMELWTCGFQPNSHILVGHLSKGINPISIKFLNFDSKYISAVLQAGLITGMVALAEGIAIGRSFAIMKNEQIDGNKEMVAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAVFMALTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEMYHIFIVDKFDFCICMAAFLGVALLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNSALYRDMEQYPDSNRVPGIIVLQLGSPVYYANSNYIRERIFRWIRDEQAMFGSIDGSVQHVLLELSGVTSIDMTGIETLVEIRRSLQAMGIQMGIVNPRIVVMEKMIASEFTDTIGKENIYLSVDDGVERCRDTVVKPKKTDASERSSDVTTMEQRV 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7221734 7226873 - Maker00022559 Lcy2g0805 625570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0805 693 Pfam STAS domain 546 662 IPR002645 -
Lcy2g0805 693 MobiDBLite consensus disorder prediction 673 693 - -
Lcy2g0805 693 PANTHER SULFATE TRANSPORTER 44 668 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Lcy2g0805 693 FunFam Sulfate transporter 31 525 670 - -
Lcy2g0805 693 SUPERFAMILY SpoIIaa-like 550 668 IPR036513 -
Lcy2g0805 693 ProSiteProfiles STAS domain profile. 545 667 IPR002645 -
Lcy2g0805 693 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Lcy2g0805 693 Pfam Sulfate permease family 70 495 IPR011547 GO:0016020(InterPro)
Lcy2g0805 693 CDD STAS_SulP_like_sulfate_transporter 546 660 - -
Lcy2g0805 693 Gene3D STAS domain 525 670 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0805 Lcy-Chr2:7221734 Lcy3g1580 Lcy-Chr3:42933186 1.94E-227 dispersed
Lcy2g0805 Lcy-Chr2:7221734 Lcy3g2098 Lcy-Chr3:48012647 5.62E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0805 K17471 - csv:116402148 1074.69