Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0846 ATGTGGCCTGCTTCAGCCCCATTTCGAAGTCAAGAAGGAAGACCACTGTCACAATCCACTCCATTTCTGTTTACAAAAGTAAACCAAGTGCTTCTAGATTCCCCTGTTGACTTCAACAGCCCCAAAAAGCACTTCCAAAATTACCACCCACGAGAAAGTAATCAAAATCCTGCAAGTCAATTGTTATGCTTTGAATCGAGTTCGTTGCCAATTCACTCACTCAATTACCTCAAACCCCAGCACAGCGAAAAGGATCCTATCCACAGAACTCCAAAGACAAAAGTGTGGGTCTTTTATGGCCAGAAAGATGAGTCAGGGTCCACTCGAATGATAATGAGAGAACGTGGGTGGCGTTCTCAGCCGCTCGAGGCTCTTTTCATGTTGGGTAATTTGCACAATCACAAGTCCCCACTGGCTTCAAGATTAAACAAAACCCCCAAAGGAAAGATTAAATTATTGCCCTTTCTTTCTGGGATTCATGTTTTCGTCGTCTCTGTGGAGGGGCCGTTTGAAAAGACGAAAAATCTTCAGCGGCAGATAGCTGCTTCTGCGAGCTTGATCTTCGCTGACCTCTGTTCTGCATTTTCGAGCCTCTGTTTTAGTCTTCTAAAAGATAAGGCGCGTGAGCCTGATGAATTTTGCGGCAATTCTTGTGACGCGCTCAATTTCATTTCCGTATTTACTCTAATGGGTTGCGTTTACTCGAGGGTTTGTATTGGCGAGGCTACCACCCCAAGATCGTCGAGAATAGCCGAAACCAAAAATGCCAAAACCGCCGCTGAAGTCGACGCGATCTCTTCTTCGTCTTCCAATAGTCGAGAAGGCGAAATCGGCGACCAACTGAATCAACTGAATGCAAACAACAGAGATTCAGAAGTTGGAATCACGAGGCTCTCGAGAGTTTCGTCGCAGTTTTTGCCCGCCGATGGGTCTCGAACCGTCAAAGTTCCTTCTGGAAACTTCGAATTGCGATATTCGTTTCTTTCGCAAAGAGGGTATTATCCCGATGCCCTCGATAAGGCGAATCAAGACAGTTTTTGCATCCACACCCCATTTGGGAACAGCCCAGATGATCATTTCTTCGGGGTTTTCGATGGGCATGGGGAATTCGGAACACAGTGCTCGCAGTTTGCTAAACGAAAGCTCTGTGAAAATTTACTTAGGAATAGTAGATTCCACAGTGACGCAGTGGAGGCTTGCCATGCGGCCTATTTGACGACTAATTCACAGTTACACGCAGATATCTTGGATGATAGTATGAGTGGTACTACTGCCATTACTGTTTTAGTTAGAGGTAGGACTATATATGTTTCTAATTCAGGTGATTCAAGAGCGGTTCTAGCAGAGCAGAGAGGGAAGGAAGTTGTGGCTGTCGACCTCTCAATCGATCAAACTCCATTTCGGACTGATGAACTCGAACGTGTTAAGCTTTGTGGTGCCAGAGTTCTTACACTTGATCAGATTGAGGGGCTGAAGAACCCTGATGTTCAGTGCTGGGGTACTGAAGAAGGAGATGATGGTGATCCTCCTAGGCTCTGGGTGCCTAATGGGATGTACCCTGGCACTGCTTTTACAAGAAGTATAGGTGACTCAATTGCTGAGACTATTGGAGTTGTTGCTACGCCTGAAATTGTTGTTGTGGAGCTCACACCAGATCATCCTTTCTTTGTTGTTGCTAGTGATGGGGTTTTCGAGTTTCTTTCGAGCCAAACCGTGGTCGACATGGTTTCTAAATATAAAGATCCCCGTGATGCTTGTGCTGCGATTGTGGCTGAGTCTTACAGACTTTGGCTTCAATTTGAGACTCGAACAGATGATATCACTGTTATTGTGACGGTTACTAGTGAATCGATGAGATCTGATGGAGGTGGTTTTGTTCGATCTGCTTTTCCTCAAGTCGTGGAGGTGACGGGATCAGAGTCTCCCTCTACCTTTGGCTGGAATAGAAACAATCGTGCAAGGCAAGATTTGTCAAGGGCACGGCTCCAGGCTATCGAAAATTCCCTAGAGAATGGGCAAGTCTGGGTGCCTCCATCTCCAGCTCACAGGAAAACATGGGAAGAAGAAGCACATATTGAACGAGCATTGCACGACCATTTCCTCTTCAGAAAACTAACCGATTCTCAGTGCCAAGTTTTATTAGATTGCATGCAAAGAGTTGAGGTCATACCGGGGCAAATTGTAGTTGAACAAGGTGGTGAAGGTGACTGTTTCTATGTGGTTGGCAGTGGAGAATTTGAGGTCTTGGCAACCCAGGAAGAAAGCCATGGAGAGGTTCCTCGAATTCTGCAACACTACACCGCTGAGAAGCTATCTTCCTTCGGCGAACTGGCTCTGATGTATAACAAACCACTTCAAGCCTCAGTACGTGCTGTGACGAGTGGGACACTTTGGGCTTTGAAAAGAGAGGACTTTCGTGGAATTCTTATATCAGAATTTTCTAACCTGTCATCTTTGAAATTGCTTCGATCCGTGGACCTTCTGTCGAAGTTGACAATCTTGCAATTGAGTCACATTGCAGATTGCCTTTCTGAAGTTACCTTCTCAGATGGGCAGCTGATAGTTGATGGGACCGAAGGTTTATGTGCACTGCACATTATTCAGAAGGGACAGGTGAGGATTACTTTTGATGCGGAGTTAATGAGCAGTTCAAACGTTTACAGCTTCAATTATGCCAGTAAAAAAGAGGATGATGCTGCACAGAGTGGTAACGAGATCTCAGTTATTAAGAAAGAGGGAAGTTATTTTGGTGAATGGGCACTTCTTGGTGAGCGTATCGGCTTCTTACGTGCCGTTGCTGTGGGAGATGTTGTGTGTGCTATTTTAACAAAGGAAAAGTTTGAGTCAGTAGTTGGCCCTTTACCAAAGCTCTCTCAAAATGATCAAAATCATGTTATAGCTTCTACACATTGTTTAATTCCATGTAGGGCAAAGGAACATTCTTCAGACTCCCTCCATAACTCTGCCAAAATTATGGATATTTCGGCTCTTTCAAAAGTTGAGCTTGCTGATCTGGTGAGAATGCATTTTGCTGTTTGTGCAGAAACTATGCTTAGTTTGAAAAAGTTTACAAGACAGAAGGTCAAAAGGCTGGGACTTGAAGCACAAGTTTTGAAGGAGAAAAATCTTATGAAGAGCATCAGTCCTTCAGCTTGTGTGCCGCAACTTCTCTGCACTTGTTTAGATCAATCACATGCTGGCATATTGCTGAAAACATGCCTTGCTTGTCCTTTCTCTTCGATACTTCATGTCCCACTCGATGAATCTTCTGCACGTTTCTATGCAGCCTCTCTTGTTGTAGCACTGGAAGATTTGCACAAGCTTGGTGTTCTCTACAGAGGAATCTCCCCTGATGTTCTAATGTTGGATCGAACCGGACACATACAGTTAGTGGACTTCAGATTTGGGAAAAGCACATCGGGTGAGAGAACGTATACCATTTGCGGGATGGCGGACTTTTTAGCACCTGAGATAGTTCAGGGCAATGGTCATGGTTTTGCTGCTGACTGGTGGGCGCTGGGAGTCTTAATCTATTTCATGCTGAAGGGTGAAATGCCATTTGGGTCATGGCGACAAAGCGAGCTCGATACATTTTCAAAGATTGCAAAAGGACAATTAAGCCTTCCCCAGATTTTCAGTCCTGAAGCCATTGATCTCATCGTCAAGTTACTTGAAGTTGATGAGAAGAAAAGACTCGGTAACGAGAACCAAAACTCTGTTAGAAGTCATCCCTGGTTTGATGGCGTTGATTGGAACGGGATCCGTGACGGTACCTTTCCCGTTCCCGACACAATCACTTCTCGTGTGGCTCAATATTTGGATAGCTACCCTGAAGATTGCAGTGTTTCTTTAGTTAAACCACCTCAAGATCCCAAAGAACAGGATGCCCCCGAGTGGATCAACGACTGGTAG 3912 44.99 MWPASAPFRSQEGRPLSQSTPFLFTKVNQVLLDSPVDFNSPKKHFQNYHPRESNQNPASQLLCFESSSLPIHSLNYLKPQHSEKDPIHRTPKTKVWVFYGQKDESGSTRMIMRERGWRSQPLEALFMLGNLHNHKSPLASRLNKTPKGKIKLLPFLSGIHVFVVSVEGPFEKTKNLQRQIAASASLIFADLCSAFSSLCFSLLKDKAREPDEFCGNSCDALNFISVFTLMGCVYSRVCIGEATTPRSSRIAETKNAKTAAEVDAISSSSSNSREGEIGDQLNQLNANNRDSEVGITRLSRVSSQFLPADGSRTVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGNSPDDHFFGVFDGHGEFGTQCSQFAKRKLCENLLRNSRFHSDAVEACHAAYLTTNSQLHADILDDSMSGTTAITVLVRGRTIYVSNSGDSRAVLAEQRGKEVVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVVELTPDHPFFVVASDGVFEFLSSQTVVDMVSKYKDPRDACAAIVAESYRLWLQFETRTDDITVIVTVTSESMRSDGGGFVRSAFPQVVEVTGSESPSTFGWNRNNRARQDLSRARLQAIENSLENGQVWVPPSPAHRKTWEEEAHIERALHDHFLFRKLTDSQCQVLLDCMQRVEVIPGQIVVEQGGEGDCFYVVGSGEFEVLATQEESHGEVPRILQHYTAEKLSSFGELALMYNKPLQASVRAVTSGTLWALKREDFRGILISEFSNLSSLKLLRSVDLLSKLTILQLSHIADCLSEVTFSDGQLIVDGTEGLCALHIIQKGQVRITFDAELMSSSNVYSFNYASKKEDDAAQSGNEISVIKKEGSYFGEWALLGERIGFLRAVAVGDVVCAILTKEKFESVVGPLPKLSQNDQNHVIASTHCLIPCRAKEHSSDSLHNSAKIMDISALSKVELADLVRMHFAVCAETMLSLKKFTRQKVKRLGLEAQVLKEKNLMKSISPSACVPQLLCTCLDQSHAGILLKTCLACPFSSILHVPLDESSARFYAASLVVALEDLHKLGVLYRGISPDVLMLDRTGHIQLVDFRFGKSTSGERTYTICGMADFLAPEIVQGNGHGFAADWWALGVLIYFMLKGEMPFGSWRQSELDTFSKIAKGQLSLPQIFSPEAIDLIVKLLEVDEKKRLGNENQNSVRSHPWFDGVDWNGIRDGTFPVPDTITSRVAQYLDSYPEDCSVSLVKPPQDPKEQDAPEWINDW 1303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7639306 7646424 + Maker00022701 Lcy2g0846 625611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0846 1303 Gene3D Jelly Rolls 669 809 IPR014710 -
Lcy2g0846 1303 SUPERFAMILY PP2C-like 312 611 IPR036457 -
Lcy2g0846 1303 CDD CAP_ED 827 959 IPR000595 -
Lcy2g0846 1303 Pfam Protein kinase domain 1019 1246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0846 1303 CDD PP2Cc 340 611 IPR001932 -
Lcy2g0846 1303 CDD CAP_ED 701 809 IPR000595 -
Lcy2g0846 1303 SMART cnmp_10 827 966 IPR000595 -
Lcy2g0846 1303 SMART cnmp_10 701 824 IPR000595 -
Lcy2g0846 1303 Pfam Protein phosphatase 2C 352 592 IPR001932 -
Lcy2g0846 1303 Gene3D Phosphorylase Kinase; domain 1 1015 1076 - -
Lcy2g0846 1303 Pfam Cyclic nucleotide-binding domain 721 809 IPR000595 -
Lcy2g0846 1303 ProSiteProfiles PPM-type phosphatase domain profile. 324 614 IPR001932 -
Lcy2g0846 1303 ProSiteProfiles Protein kinase domain profile. 986 1246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0846 1303 PRINTS cAMP-dependent protein kinase signature 737 751 - -
Lcy2g0846 1303 PRINTS cAMP-dependent protein kinase signature 772 781 - -
Lcy2g0846 1303 PRINTS cAMP-dependent protein kinase signature 947 959 - -
Lcy2g0846 1303 PRINTS cAMP-dependent protein kinase signature 722 736 - -
Lcy2g0846 1303 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 581 1303 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Lcy2g0846 1303 SUPERFAMILY cAMP-binding domain-like 681 810 IPR018490 -
Lcy2g0846 1303 ProSiteProfiles cAMP/cGMP binding motif profile. 701 809 IPR000595 -
Lcy2g0846 1303 SUPERFAMILY Protein kinase-like (PK-like) 1018 1279 IPR011009 -
Lcy2g0846 1303 SMART PP2C_4 320 612 IPR001932 -
Lcy2g0846 1303 ProSitePatterns PPM-type phosphatase domain signature. 360 368 IPR000222 GO:0043169(InterPro)
Lcy2g0846 1303 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 319 616 - -
Lcy2g0846 1303 ProSiteProfiles cAMP/cGMP binding motif profile. 827 968 IPR000595 -
Lcy2g0846 1303 SMART serkin_6 1014 1246 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0846 1303 SUPERFAMILY cAMP-binding domain-like 820 960 IPR018490 -
Lcy2g0846 1303 Gene3D - 318 614 IPR036457 -
Lcy2g0846 1303 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 675 815 - -
Lcy2g0846 1303 Gene3D Jelly Rolls 815 969 IPR014710 -
Lcy2g0846 1303 Gene3D Transferase(Phosphotransferase) domain 1 1077 1260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1482 Lcy-Chr11:38749165 Lcy2g0846 Lcy-Chr2:7639306 3.59E-128 dispersed
Lcy2g0846 Lcy-Chr2:7639306 Lcy7g0605 Lcy-Chr7:5456184 5.12E-31 dispersed
Lcy2g0846 Lcy-Chr2:7639306 Lcy13g0226 Lcy-Chr13:2315551 1.26E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65729 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0846 - - - 0.0