Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0859 ATGCATGAAGTGATAGCGGAAGAGTGGGGAAGAGAAGGAATCAACGGCCTTGAATGGCAGAAGAGGTGGGAAGTTGTGTTCTCTAATGGCTTCCAGAGGACTGATAATGAGGTCGTGTCAGAGGCGGTTGCAACCGACATGGTTGGATCCACGGCGGTTGTAGTCGTTCTATCTGGCTGCCAGATTATTGCATCCAATTGCGGTGACTCTCGGGCGGTTCTTTGCCAGCGGAATAAAGCGATTCCATTGACAGTCGATCAAAAGCCTGATAGACAGGACGAACTCATGAGAATTGAAAGAGATGGAGGCAAAGTCATTAACTGGATGGGTGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGGGACCGATATCTTCGGCCGTGGATAATTCCCGTGCCGGAAATTAGTTTCACAACAAGGAGTGATGAGGATGAATGTGTGGTTCTGGCAAGCGACGGGCTTTGGGACGTAATGACGAATGAAGAGGTTGGGCAGGTGGCTTGCCATCTTCTTAGGCGGCTCCGCAGGTCATCGACGACTGATGACACGGCTCCGGCACAGATTGTGGCTAATAATCTCACTGAAATAGCATATGGAAGAAACAGTTCCGATAACATTTCTGTTATTGTCATCGATCTGAAAGCAAGGAAAGCAAACCCACAGAGGCAATGA 681 49.05 MHEVIAEEWGREGINGLEWQKRWEVVFSNGFQRTDNEVVSEAVATDMVGSTAVVVVLSGCQIIASNCGDSRAVLCQRNKAIPLTVDQKPDRQDELMRIERDGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEISFTTRSDEDECVVLASDGLWDVMTNEEVGQVACHLLRRLRRSSTTDDTAPAQIVANNLTEIAYGRNSSDNISVIVIDLKARKANPQRQ 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7827168 7834871 + Maker00022498 Lcy2g0859 625624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0859 226 Pfam Protein phosphatase 2C 24 209 IPR001932 -
Lcy2g0859 226 CDD PP2Cc 1 216 IPR001932 -
Lcy2g0859 226 PANTHER PROTEIN PHOSPHATASE 1 215 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lcy2g0859 226 SMART PP2C_4 1 214 IPR001932 -
Lcy2g0859 226 Gene3D - 1 225 IPR036457 -
Lcy2g0859 226 FunFam Protein phosphatase 2C 50 9 223 - -
Lcy2g0859 226 SUPERFAMILY PP2C-like 2 217 IPR036457 -
Lcy2g0859 226 ProSiteProfiles PPM-type phosphatase domain profile. 1 216 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0859 Lcy-Chr2:7827168 Lcy6g0081 Lcy-Chr6:773112 7.82E-55 dispersed
Lcy2g0859 Lcy-Chr2:7827168 Lcy13g0137 Lcy-Chr13:1323540 1.83E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0859 K14497 - csv:101220173 425.631