Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0904 ATGGAGAAGGGTCATCTTGATGTGGCTGGGAAAGTGGTGGTCGTCGCCATTAAAGCAACCTCGAAGGAAGTTTCTAAGGCTGCTCTGGTTTGGGCTTTAACTCATGTTGTTCAGCCTGGAGATCATATCAAGCTCCTTGTGGTTATCCCTTCTCATCAATCAAGTAAATGGATGCGAGGATTTTCCCGATTTACCAGCGACTGTGCGATCGGTCATCTGAGAACTTCATCAGGAACCCTTTCAGATCAGAAGGATGACATTGTCCATTCATGTTCTCAAATGGTACATCAGCTTCATGGTGCATATGACCCACTGAAGATAAAAGTCAGGATCAAAGTTCTTTCTGGTTTGGCTCGGGGTATGGTGGCTACTGAAGCTAAGAAAGCTCAATCGAACTGGGTGATATTGGACAAACACTTGAAAGATGAAAGGAAAAACTGTTTGGAAGAGCTGCAATGCAATGTTGTTCTTATGAAGAAATCCCAGCCTAAGGTTCTTCGTCTGAATTTGATGGAATCCCCTAAGATGAATTCTAGAGAAGCTTGGATATCATCACATGAATTAGATGTTTCTCAGAAGTGTCTTAAAAGCTACTTTGATGAATCAGTCATGTTTGGGGCTCCTGATGTGACTCCTGGCAGTACTCCTGATGTAGAGTCTCCTCTAACCGTAACTGATGTTGGAACATCGTCAATATCGAGCTCGGATGTGGGCAGTTCATCTTTGTTCTCTGGGATATGTGGCAGCTTGAGAAATGAATCCAGAACAGCAGCCGAAGGAGGGAGAAACTTGTCTGGATCGGAATGTGATTCTGAGAGTGAAAAGCAGACTCCCTCAGTTTCATATTTCCAGCGTTGTATGGTTGATGTTATAAGTTCCAGGCGTAAATTCCAGCAACATACAATGGAAGAATCACAAAATACTCATCATAGACCTCCGGCTTCAACACATCAAGGTCCAGTTAAGAAAATGTCGACTCTTTCTCTAGAACCCGGCACTGATGTGGTGAATCGAAATAGCGATATTAGCTCAAGCAGAAACATAAGGAACACGGTTTCATTATCCAGGAAAGCACCACTAGGCCCTCCTCCACTGTGTTCTATGTGTCAACACAAGGCCCCTGCATTTGGGAATCCTCCTAGATGGTTCACTTATGCAGAACTGGAAGTTGCTACAAGCGGATTTGCACAAACAAATTTTTTGGCTGAGGGTGGATATGGATCTGTGCACCGAGGCGTCTTACCAGATGGACAAGTTGTTGCTGTCAAGCAATATAAACTGGCTAGTACCCAGGGGGATCGAGAATTTTGTTCAGAAGTTGAGGTCTTAAGTTGTGCCCAACATCGGAACGTTGTGATGCTCATCGGATTTTGTGTGGAGGGTGGAAGAAGATTGCTTGTTTATGAATATATTTGCAATGGATCTCTTGATTCCCATCTTTATGGAAGAAATCGTGATCCACTGAAATGGTCTGCACGACAAAAAATTGCAGTCGGAGCTGCTCGTGGTTTGAGATACCTTCACGAAGAATGTAGAGTGGGCTGTATTGTGCATCGCGATATCCGCCCAAACAATATCCTCCTTACTCATGATTTTGAACCACTAGTTGGAGATTTTGGGCTGGCAAGGTGGCAGCCGGATGGTGACCTAGCAGTAGAAACCAGAATCCTTGGGAGATTTGGCTACTTGGCTCCAGAGTATGCACAGAGTGGCCAAATCACGGAGAAAGCCGATACATACTCATTCGGCGTAGTTTTGCTGGAACTCGTGACTGGACGCAAGGCAATCGATCTAAATCGTCCCAAGGGCCAGCAGTGCCTCACTGAATGGGTAAGTCAGTCTCAGAAGTGGCAAAGCACGAAACCTGCTGCGAAAAGGTGCAATCTCGGAACTGGTCGATCCATGCTTGATGAACTGTTATTCAGACGAGGAAGTTCACCGTATGCTGCAATGTGCTTCCTTGTGTATCAAGCACGACCCGTATGTAAGACCGCGTATGTCTCAGGTGCTTCGGGTTTTGGAGGGCGACATCGTTTTATAAACCAGCAGCCATGTATGAAGCTTGCAGGAAAATTTTGCAGAGTTGTAACAGTATTTGCTCTGAAATCAACACTCAGCTAA 2121 45.07 MEKGHLDVAGKVVVVAIKATSKEVSKAALVWALTHVVQPGDHIKLLVVIPSHQSSKWMRGFSRFTSDCAIGHLRTSSGTLSDQKDDIVHSCSQMVHQLHGAYDPLKIKVRIKVLSGLARGMVATEAKKAQSNWVILDKHLKDERKNCLEELQCNVVLMKKSQPKVLRLNLMESPKMNSREAWISSHELDVSQKCLKSYFDESVMFGAPDVTPGSTPDVESPLTVTDVGTSSISSSDVGSSSLFSGICGSLRNESRTAAEGGRNLSGSECDSESEKQTPSVSYFQRCMVDVISSRRKFQQHTMEESQNTHHRPPASTHQGPVKKMSTLSLEPGTDVVNRNSDISSSRNIRNTVSLSRKAPLGPPPLCSMCQHKAPAFGNPPRWFTYAELEVATSGFAQTNFLAEGGYGSVHRGVLPDGQVVAVKQYKLASTQGDREFCSEVEVLSCAQHRNVVMLIGFCVEGGRRLLVYEYICNGSLDSHLYGRNRDPLKWSARQKIAVGAARGLRYLHEECRVGCIVHRDIRPNNILLTHDFEPLVGDFGLARWQPDGDLAVETRILGRFGYLAPEYAQSGQITEKADTYSFGVVLLELVTGRKAIDLNRPKGQQCLTEWVSQSQKWQSTKPAAKRCNLGTGRSMLDELLFRRGSSPYAAMCFLVYQARPVCKTAYVSGASGFGGRHRFINQQPCMKLAGKFCRVVTVFALKSTLS 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8293220 8297996 + Maker00021792 Lcy2g0904 625669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0904 706 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 367 470 - -
Lcy2g0904 706 Pfam Protein tyrosine and serine/threonine kinase 399 595 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0904 706 Gene3D Phosphorylase Kinase; domain 1 366 470 - -
Lcy2g0904 706 ProSitePatterns Tyrosine protein kinases specific active-site signature. 516 528 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0904 706 ProSiteProfiles Protein kinase domain profile. 395 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0904 706 PANTHER OS01G0750732 PROTEIN 149 612 IPR050885 -
Lcy2g0904 706 SUPERFAMILY Protein kinase-like (PK-like) 376 611 IPR011009 -
Lcy2g0904 706 Gene3D Transferase(Phosphotransferase) domain 1 471 640 - -
Lcy2g0904 706 MobiDBLite consensus disorder prediction 254 276 - -
Lcy2g0904 706 MobiDBLite consensus disorder prediction 298 321 - -
Lcy2g0904 706 Gene3D HUPs 11 164 IPR014729 -
Lcy2g0904 706 SMART tyrkin_6 395 636 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0904 Lcy-Chr2:8293220 Lcy9g2164 Lcy-Chr9:46332711 3.84E-148 dispersed
Lcy2g0904 Lcy-Chr2:8293220 Lcy13g0161 Lcy-Chr13:1651314 6.03E-250 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65733 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0904 - - - 0.0