Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0907 ATGAGGTTACCGTCCTCTGCAATTCTTGTCTTCTTGCTCTTCTTTCATCTTCTTCTTTGCTTCGCTACTTTCCCTTCCCTTTCCATCTCCCTCTTAACCGTCACTAAATCCGACTTGGTGCCCGGCGAGATCAATGCTACTTCCGACTCCAACTCCTCGAGATCCGCCAATGATGACCACAGTTTCGCTAACATAATCGATCGGGCTCTCGAGAGGGAATTTACTGAGAATGAGCAGAGTGATGAAGTTACTCGTTATGTGTTCTTACCTCGAGACCGTTTTACGTTAGTGATTTTGTCTGGTATTGGGAGTTTGATGGAACTCATATTCTGCATGCTACTTAGATGTCCCCTTGGTCTCCGCAAATGTGGAAAGTTAGCAGGCTTTGAACTGGAAAGAGCTTTTGATGCACTACTTGCGGATGCTGGCGGCTTCAACAACAGCGTTGCTGAGAAGCAGGCAGTTTTGGAAACTGTTGCCAGAGTTAAGTCAAAGAAGAATGAATCAAAAGAGGAGAAATCATTTCAGTTCCATGATGTCTTCCATTTAGATAATGAGAATCGACCAGAAGACATGCCCACATTAATTGATCGAAAGGACAATGTCTTTATTATATCAAATCCCAAGTCGAAGTATCCAGTGCTCCAATTGGATTTAAGATTGATTTCGGATCTAGTTGTTGTTATTGTTTCTGCGACTTGTGGTGGCATTGCTTTTGCTTGTGCTGGACAACCGGTCTTTACTGGATACCTGTTGGCTGGATCTCTCATTGGACCCGGGGGTTTAAGCTTTGTCAGTGAAATGGTGCAAGTTGAGACAGTTGCTCAGTTTGGTGTCATCTTCCTTCTTTTTGCATTGGGCTTGGAGTTCTCCACTACAAAACTTCGTGTTGTTCGAGCGGTGGCTGTTCTTGGAGGATTGCTCCAGATTTTCCTTTTTATGTGCTTGTGTGGAATTACAGCTTCGCTTTCAGAGCCCAAGTTAAAAAAATATCTTGATGGTTTAGGTAAGCTCAGTGCAGTTATACTTGAGTCTTTTTGCTTTGTAAATCTGTTATGTGGCGGTAAATCTTCAGAGGGGGTATTTGTCGGTGCATTCCTGTCTATGTCTTCAACTGCAGTGGTCTTGAAATTTTTAATGGAACGAAATAGCGTCAATGCCCTTCATGGGCAGGTGACCATTGGTACTCTTATTCTTCAGGATTGTGCTGTAGGCTTGCTGTTTGCCTTGCTTCCGATTCTTGGTGGTACTTCTGGTGTTCTTCAAGGAGTTCTGTCCATGACCAAGTCGTTGGTGGTCTTGATTACGTTTTTGATTATTTTGACAATATTATCTCGCACATGTGTTCCGTGGTTCCTTAAGCTTATGATTAGCCTGTCATCTCAGTGCAGTGATAAACTTGGCTTAAGCCTTGAATTGGGTTCCTTTGCTGCGGGTGTGATGATATCAACTACTGATCTTGCTCAGCACACACTTGAACAGGGGATGAGACAGTCAGATGAGGTTGAGCCCATTCGCAACTTCTTTGCTGCTCTTTTTCTAGCCAGCATTGGGATGCTAATTCATGTTCATTTCCTATGGAACCACATTGATATTTTACTTGCGGCTGTAATATTGGTCATCATTATAAAAACTGTAGTGATTACTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCACTTCTGGTTGGGATGTCACTCGCACAAATTGGGGAATTTGCTTTTGTCCTTCTAAGCCGTGCCTCTAATCTTCATCTTGTCGAGGTTGGTGCTTTAATTGCAAGCTTGTCTTTGATTGAGATTCATAATTTCTTGGTGTTGATAAGAACTGGAAAATTGTATATACTGCTGCTTGGGACAACTGCACTTAGTCTGGTGACTACCCCATTGCTTTTCAAGCTTATTCCTGCTGTGGTACGGATTGGAGTGTTGTTGCGGTGGTTTTCACCTGATGGTTTGAGTGAGATTGGATTCAAAGGAGATGGCTTCCGAACAGATGGTGTCAAGCGCATTGCTTTGGTGGTTCGAGACACTCATGTTTCATGA 2052 43.03 MRLPSSAILVFLLFFHLLLCFATFPSLSISLLTVTKSDLVPGEINATSDSNSSRSANDDHSFANIIDRALEREFTENEQSDEVTRYVFLPRDRFTLVILSGIGSLMELIFCMLLRCPLGLRKCGKLAGFELERAFDALLADAGGFNNSVAEKQAVLETVARVKSKKNESKEEKSFQFHDVFHLDNENRPEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVFTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLCGITASLSEPKLKKYLDGLGKLSAVILESFCFVNLLCGGKSSEGVFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPILGGTSGVLQGVLSMTKSLVVLITFLIILTILSRTCVPWFLKLMISLSSQCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQGMRQSDEVEPIRNFFAALFLASIGMLIHVHFLWNHIDILLAAVILVIIIKTVVITTVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEVGALIASLSLIEIHNFLVLIRTGKLYILLLGTTALSLVTTPLLFKLIPAVVRIGVLLRWFSPDGLSEIGFKGDGFRTDGVKRIALVVRDTHVS 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8317292 8329439 - Maker00021735 Lcy2g0907 625672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0907 683 Pfam Sodium/hydrogen exchanger family 229 635 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lcy2g0907 683 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 341 658 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Lcy2g0907 683 Gene3D - 219 643 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0907 Lcy-Chr2:8317292 Lcy4g0123 Lcy-Chr4:1627379 4.56E-15 dispersed
Lcy13g2183 Lcy-Chr13:40764399 Lcy2g0907 Lcy-Chr2:8317292 5.38E-71 transposed
Lcy6g0227 Lcy-Chr6:2049188 Lcy2g0907 Lcy-Chr2:8317292 1.91E-169 transposed
Lcy13g2181 Lcy-Chr13:40751237 Lcy2g0907 Lcy-Chr2:8317292 5.46E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0907 K26735 - csv:101208614 809.29