Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0944 CTGGTGGCTTTGTTTTTGGCTATTTCAGCTGTTGAAGCTTTGTGGAGTGGACCAGTTAACATTATTGTAGGTTCTCATGTCTGGATCGAAGATCCAAAACTAGCTTGGGTTGATGGTGAAGTTTTTCGCATCAATGGCGAGGAAGTTCACGTCCGTGCAACAAATGGGAAAACAGTTGTTACGAATATATCAAAAATATTCCCCAAGGATACTGAAGCACCTGCTGCAGGTGTTGATGACATGACAAAATTGTCATACTTGCATGAACCTGGAGTTCTGAGCAACTTGGCGACCAGATATGAACTCAATGAAATCTATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGATTACCCCATCTGTATGATACTCACATGATGGAACAATACAAAGGAGCTGGATTTGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATATAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACGAAGATGCTCATGCGGTATCTTGCGTACCTTGGAGGTCGATCTGGAGTGGAAGGGCGAACGGTTGAACAACAAGTCCTGGAATCCAATCCAGTTCTTGAAGCATTCGGCAATGCAAAAACGGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTCGTTGAGATCCAATTTGACAAGAGTGGGAGAATATCTGGGGCAGCTGTCCGGACTTATCTGCTTGAAAGGTCTCGAGTATGTCAGATCTCAGATCCTGAAAGAAACTATCATTGCTTTTACCTTCTCTGTGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGCAAACCCTAAATCATTCCACTACTTAAATCAATCTAACTGCTTTGAGTTGGATGGAGTGAACGATGCCCATGAATATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAACATTGAATTTGCAAAGGGAGAGGAGATTGATTCTTCGGTCATTAAGGATGAAAAATCCAGATTCCATCTTAATACCACTGCCGAACTCCTCAAGTGTGATGCAAAGAGTTTGGAAGATGCACTGATTCAACGTGTTATGGTAACACCTGAAGAGGTTATAACTCGAACTCTTGATCCTGTGGCTGCATTGGGTAGTAGGGATGCCTTGGCTAAAACGATTTATTCACGGCTCTTTGACTGGCTCGTGGAGAAGATTAACAATTCAATTGGGCAAGACCCAAATTCTAAATCATTGATTGGAGTTCTGGATATATATGGATTTGAGAGTTTTAAATTCAACAGTTTCGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATTGAGTTTGTTGATAATCAGGATGTCTTGGATCTGATTGAAAAGAAACCTGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACATTTGCTCAGAAGTTGTACCAAACGTTCAAGAACAACAAGCGCTTCATTAAGCCTAAGCTATCTCGTACTAGTTTTACAATATCTCACTATGCTGGAGAGGTGACTTATTTGGCTGATCTATTCTTGGACAAAAACAAAGACTATGTGGTAGCAGAACATCAGGCCCTATTGACTGCCTCAAAATGCTCCTTTGCGAGAGCTCTATTTCCTCCTCAACCAGAGGAATCAGCAAAATCAAAATTTTCTTCCATTGGTTCACGTTTTAAATCACAACTTCAATCTTTAATGGAGACCTTAAATTCAACGGAACCTCACTACATCAGATGTGTGAAGCCAAATAATGCCCTCAAGCCTGCTATTTTTGAGAACTCAAATGTTATCCAACAATTACGTTGTGGTGGTGTTCTTGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACGAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTTTAGATGGAAACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGATTGAAAGGTTATCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGCCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAATGCTGCCAGAACTATTCAAATGCAAATTCGAACATTTATTGCACGCAAGGAGTTTGTTGCATTACGTAAAGCTGCTATACAAGTGCAATCATTTACTCGAGGTGTATTGGCTCGAAAACTCTTTGAGCAGTTGCGGCGGGAAGCAGCAGCTTTAAACATCCAGAAGTGTTTCAAGAGATATATTGCCAGGAAGTCATACTTAGATTTGCTCTCATCTGCAATCACATTGCAAACAGGGTTAAGGGCAATGAAGGCTCGTGATGAATTCAGATTTAGAAAGCGTACTAAAGCAGCAATTATCATTCAGACACGTTTGCGTTGTCACTTGGCATATTCTTACTATACGAGACTCCAAAAGGCTGCATTGACCACACAGTGTGGTTGGAGGCGACGGGTTGCACGCAAGGAGCTAAGAAAACTGAAAATGGCTGCAAGGGAAACCGGTGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTTGAGAAGCGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAACTTGCCAAATTACAAGATGCTTTACACAGTATGCAATTACAAGTTGAAGAAGCAAATGCTCAAGTTATCAAAGAGCGAGAGGCGGCTCGGAAAGCTATTGAAGAAGCACCTCCAGTGGTCAAGGAAACTCCAGTTTTTGTTGAGGATACTGAGAAAATCAATTCCTTAATGGCTGAGGTGGAAAATTTGAAGGAAAGTAGAGAAAGAACTCAATCTGGGTCTCCAAGAGGGACGCCTCAAGCATTGTATTCTCCCACTCCTCTGGCCGGTCTTAACACCGACGAGAGACTCCAAAAGAAATTCAGCAATTGGTATTTATCCCCCTCAGCGTGTCGTCTCTGTCTCAAGGCCGAGGAGATGTTAGACCATGTGTTTCTGCATTGCACCTTTGCGGGTAAGGTGTGGAGCTTTATAGCCAACCGGCTGGGATTATCCTTTTGTGTCCCTAGAAAGATTGATGAGTGGATGAATGAAGGGTTGGTTGCTTGGAATCTTAAGAGTAAGGCCAAGATCATTGCTAGTTGTGCTTTCAGGGCTTCGACATTCCAGAAAATTGTCTCCAAATCTCCTAGAATTAAAAGTGGGCTGGTGGATCAGATCTGGAAGTCTAAATGCCCTAAAAAAGTTAAGGTTTTCCTATGGTCTGCTGCATACCGAAGCCTAAACACCGAAGAAGCCCTCCAAAAGAAATTCAGGAATTGGTCTCTCTCCCCTTCAAGTTGTAGGCTGTGTCTCAGAGATGGTGAAAACATAGATCACATATTTATTCATTGTGGTTTGGCTGCTCATGTGTGGAACTATGTTGCTGGTCTTTTGGGATTATCCTTCTGCTTGCCTAGAAGAATAGAAGACTGGATGGCAGAAGGCCTTGAAGCTTGGAATCTTAAAGGAAAAGCTAGAATTATAGCTAATTGCGCTTATAGGGCCACTTTATGGACTCTATGGAAACTAAGGGAATACCTGGAAAGCGATTTTAAAAATAGTTATGCTTCGCTGCTGTCAGAAAAAAAGACTGCTGAAGAGGCTAAAAAAGCTTGTGCCGATGCTGAAGCTAAAAATGTGGAGCTGGCTAAAAAACTTCAAGATGCAGACCAGAAGGTGGATCAACTTCAGGAGTCAGTGCAGAGGCTTGAAGAAAAGCTTTCAAATTCAGAATCAGAGAACCAGGTACTTCGTCAGCAAGCCTTGACCATGTCGCCAACAGGAAAAGCTTTATCTGCAAGACCGAAGTCAATGATTATTCAGAGGACACCGGAGAATGGAAATATTCCACATGGAGAGGCCAAAGTATCATCGGATGCAGCTCTTGCATTATCAACTGTACGCGAGCCTGAATCAGAGGAAAAACCACAGAAATCACTTAATGAAAAGCAGCAGGAGAACCAGGACCTGCTAGTGAAGTGCATAACACAGGATTTGGGATTTTCTGGAGGCAAACCAGTTGCTGCTTGTGTCATATACAAATGTCTTCTTCACTGGCGGTCATTTGAAGTTGAAAGAACGAGCATATTCGATCGAATCATTCAAACAATAGCTTCCTCCATAGAGGTCCAGGATAACAACGATGTATTAACTTATTGGTTATCCAATACATCCACATTATTGTTGCTTCTTCAACACACTCTCAAAGCAAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTGCTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGTTTAAGGGCATCTCCACAGAGTGCTGGACTATCATTTCTTAACAGTCGGGGGCTTGGTAGATTGGACGATTTTCGGCAGGTTGAGGCGAAGTATCCAGCACTATTATTTAAGCAGCAGCTTACAGCATTTTTGGAGAAAATATATGGAATGATAAGAGACAACCTAAAGAAAGAGATCTCGCCTTTACTTGGATTATGTATTCAGGCTCCTAGGACATCACGAGCAAGCTTAGTGAAAGGACGCTCCCAAGCTAATGCTATGGCTCAGCAAGCCTTAATTGCTCATTGGCAAAGCATTGTAAAAAGTTTAAACAATTATTTGAAGATCATGAAAGCAAACTATGTACCTCCATTCTTAGTCCGCAAGGTCTTCACTCAGATATTCTCATTTATTAATGTTCAACTATTTAACAGTCTTCTTTTGCGGCGTGAGTGTTGTTCATTCAGCAATGGAGAGTATGTGAAAGCTGGCTTGTCTGAATTAGAACAGTGGTGTTCTGGAGCAACTGAGGAATATGCAGGGTCTGCTTGGGATGAATTAAAGCATATTAGGCAGGCTGTTGGATTCCTTGTTATACATCAAAAACCCAAAAAGACCTTGAATGAGATAACTAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTATATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACATAGTGTATCTTCAGAAGTTATTTCAAGTATGCGAATTCTGATGACTGAAGACTCCAACAATGCTATTAGCTCATTCCTGTTAGATGATGACTCTAGTATCCCATTTTCTGTGGATGATATTTCCAAATCAATGAAACAAGTAGATGTAACAGACATTGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGGTTTTTGCTTCAACGTGCAGAGTAA 5424 41.7 LVALFLAISAVEALWSGPVNIIVGSHVWIEDPKLAWVDGEVFRINGEEVHVRATNGKTVVTNISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKYKLANPKSFHYLNQSNCFELDGVNDAHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCSFARALFPPQPEESAKSKFSSIGSRFKSQLQSLMETLNSTEPHYIRCVKPNNALKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIQVQSFTRGVLARKLFEQLRREAAALNIQKCFKRYIARKSYLDLLSSAITLQTGLRAMKARDEFRFRKRTKAAIIIQTRLRCHLAYSYYTRLQKAALTTQCGWRRRVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQELAKLQDALHSMQLQVEEANAQVIKEREAARKAIEEAPPVVKETPVFVEDTEKINSLMAEVENLKESRERTQSGSPRGTPQALYSPTPLAGLNTDERLQKKFSNWYLSPSACRLCLKAEEMLDHVFLHCTFAGKVWSFIANRLGLSFCVPRKIDEWMNEGLVAWNLKSKAKIIASCAFRASTFQKIVSKSPRIKSGLVDQIWKSKCPKKVKVFLWSAAYRSLNTEEALQKKFRNWSLSPSSCRLCLRDGENIDHIFIHCGLAAHVWNYVAGLLGLSFCLPRRIEDWMAEGLEAWNLKGKARIIANCAYRATLWTLWKLREYLESDFKNSYASLLSEKKTAEEAKKACADAEAKNVELAKKLQDADQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNIPHGEAKVSSDAALALSTVREPESEEKPQKSLNEKQQENQDLLVKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVQDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTASASLFGRMSQGLRASPQSAGLSFLNSRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLNNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE 1807
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 8748138 8767345 + Maker00022472 Lcy2g0944 625709
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0944 1807 FunFam Myosin 2 326 440 - -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 771 800 - -
Lcy2g0944 1807 FunFam Myosin XI D 680 743 - -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 844 873 - -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 796 825 - -
Lcy2g0944 1807 PRINTS Myosin heavy chain signature 496 524 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 PRINTS Myosin heavy chain signature 443 471 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 PRINTS Myosin heavy chain signature 163 188 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 PRINTS Myosin heavy chain signature 106 125 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 PRINTS Myosin heavy chain signature 210 237 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 SMART DIL_2 1626 1733 IPR002710 -
Lcy2g0944 1807 FunFam Class V myosin 453 596 - -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 867 896 - -
Lcy2g0944 1807 Gene3D Myosin VI head, motor domain, U50 subdomain 326 614 - -
Lcy2g0944 1807 FunFam Myosin heavy chain 266 321 - -
Lcy2g0944 1807 FunFam unconventional myosin-Va 750 798 - -
Lcy2g0944 1807 FunFam unconventional myosin-Va 847 894 - -
Lcy2g0944 1807 Coils Coil 981 1008 - -
Lcy2g0944 1807 Pfam DIL domain 1626 1730 IPR002710 -
Lcy2g0944 1807 Pfam zinc-binding in reverse transcriptase 1127 1200 IPR026960 -
Lcy2g0944 1807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 798 896 IPR027417 -
Lcy2g0944 1807 Gene3D - 680 743 - -
Lcy2g0944 1807 Gene3D - 846 895 - -
Lcy2g0944 1807 Gene3D - 798 845 - -
Lcy2g0944 1807 Gene3D - 746 797 - -
Lcy2g0944 1807 Pfam IQ calmodulin-binding motif 845 864 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 Pfam IQ calmodulin-binding motif 798 816 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 Pfam IQ calmodulin-binding motif 869 888 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 Pfam IQ calmodulin-binding motif 772 791 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 Coils Coil 890 970 - -
Lcy2g0944 1807 Gene3D - 453 636 - -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 748 777 - -
Lcy2g0944 1807 ProSiteProfiles Myosin motor domain profile. 76 745 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 Gene3D Kinesin motor domain 79 675 IPR036961 -
Lcy2g0944 1807 PANTHER MYOSIN 26 1749 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Lcy2g0944 1807 Gene3D - 266 324 - -
Lcy2g0944 1807 SMART MYSc_2a 70 746 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 CDD MYSc_Myo11 90 733 IPR036018 -
Lcy2g0944 1807 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 22 71 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 MobiDBLite consensus disorder prediction 998 1020 - -
Lcy2g0944 1807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 798 IPR027417 -
Lcy2g0944 1807 Pfam Myosin N-terminal SH3-like domain 23 65 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 FunFam unconventional myosin-Va 799 846 - -
Lcy2g0944 1807 Pfam Myosin head (motor domain) 78 733 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Lcy2g0944 1807 Coils Coil 1267 1329 - -
Lcy2g0944 1807 CDD MyosinXI_CBD 1391 1773 IPR037975 GO:0007015(InterPro)
Lcy2g0944 1807 ProSiteProfiles Dilute domain profile. 1440 1751 IPR002710 -
Lcy2g0944 1807 ProSiteProfiles IQ motif profile. 819 848 - -
Lcy2g0944 1807 SMART iq_5 795 817 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 SMART iq_5 843 865 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 SMART iq_5 747 769 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 SMART iq_5 770 792 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 SMART iq_5 866 888 IPR000048 GO:0005515(InterPro)
Lcy2g0944 1807 SMART iq_5 818 840 IPR000048 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2224 Lcy-Chr13:41111268 Lcy2g0944 Lcy-Chr2:8748138 1.03E-292 dispersed
Lcy13g2225 Lcy-Chr13:41134946 Lcy2g0944 Lcy-Chr2:8748138 1.93E-104 dispersed
Lcy2g0080 Lcy-Chr2:624242 Lcy2g0944 Lcy-Chr2:8748138 4.90E-73 dispersed
Lcy2g0944 Lcy-Chr2:8748138 Lcy4g2008 Lcy-Chr4:46557902 0 dispersed
Lcy2g0944 Lcy-Chr2:8748138 Lcy3g1285 Lcy-Chr3:38810644 1.10E-92 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0944 K10357 - csv:101204300 1878.22