Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g0953 | ATGGAGTACTCAGTTTTCTATTCATTGGCACTTTTCTTGGTCGTTTGTGGAGTGACAAAAGCTTTCCACTCCATTTGGTGGCGACCCAAATTGGTGGAGAGACGGTTGAAAAGACAAGGAATTAGGGGCAGTGCCTACAAGCCTTTGGTTGGTGATGTCAAAGAGTATGTGAAGATGATCACTGAAGCATGGTCCACCCCCATGAATCTCAACCATAAGATCGTTCAACGTGTCGATCCGTTCACGGCAATGAGCGCTAAAAAATATGGAAAGGTATCGATGTGTTGGTTTGGGACAAGTCCGAGATTGATGGTGAATGACCCGGAGATGATGAAAGAAGTATTGTCAAACAAGGTGGGTAGCTTTGAGAAGCCACCATTGAACCCACTTATTCTGAAGCTGACCAAGGGATTAACTGCTCTTAAAGGGGAGGAATGGGCTAAGCACAGGAGGATTATCAATCCTGCTTTTCATCTAGAAAGGCTCAAGGGAATGATGCCAGCCTTTACTATAAGCTGTAGCAACATGATAGAGCATTGGAAGCAGCTGGCTGCAGATCAAGACACTGTTGAAGTGGATGTGTGGCCTGAACTTCAAAGACTAACTGCAGATGTTATATCTAGGGCTGCATTTGGCTCTAATTTTGAAGAAGGGAAGAAGATTTTTGAACTTCTCAAACAACTCACTCTTCTTACTCTTGAAGCCATGCAGACCTTGTATCTTCCTGGTTTCAGATTTGTTCCAACAGCTAAGAACAGGAGGAGAGAGAAGCTGAACAAGGAGATCAAAACCATGATAAGGAATTTAATTCTAAGAAAAGAGAATTCCATGAGTAACCAGGAAAACAATGCTGATGACTTATTATGCCTGCTCTTGCAATCAAAGAAAAAAGAAAATCAACATGAAGGTGATGGATTGACAATTGATGAAGTGATGGAGGAGTGCAAGCAGTTCTACCTTGCAGGACAGGAAACAGTAGCAAGCTACCTTACTTGGACCGTCATAGTTTTAGCCATGCACTCAGAATGGCAAGAAAAGGCTAGGCAGGAAGTCTTGCAAATTTGTGGGAAGAAAGAACCAAACTTTGAATCTCTAAGCCACTTCAAAATTGTTACCATGATACTTTATGAAGTCCTCAGGTTATACCCACCAGTTATTGGTCAATATCAACATACTTATGCAGAAACGAAGATAGGCGAAGTTTTAATACCAGCCGGGGTTGATGTTACTTTACCTACACTGCTTATTCACCATGATCCCGAGTACTGGGGAGACGATGCAGACCAGTTCAAACCAGAGAGATTTTCTGCAGGAGTTTCCAAGGCAAGCAAAGATCAGTTGGCATTCTTTCCCTTTGGCTGGGGACCTAAGACCTGCATTGGACAAAATTTTGCTATGTTAGAAGCTAAGGTCGCATTGGCTATGATTCTACAGAATTTCTCTTTTGAGCTTTCGCCTTCTTATGCACATGCTCCCCATACTGTCATGACTCTTCAACCACAGCATGGAGCCCAGCTGAAAATTCACCAACTATAG | 1536 | 42.77 | MEYSVFYSLALFLVVCGVTKAFHSIWWRPKLVERRLKRQGIRGSAYKPLVGDVKEYVKMITEAWSTPMNLNHKIVQRVDPFTAMSAKKYGKVSMCWFGTSPRLMVNDPEMMKEVLSNKVGSFEKPPLNPLILKLTKGLTALKGEEWAKHRRIINPAFHLERLKGMMPAFTISCSNMIEHWKQLAADQDTVEVDVWPELQRLTADVISRAAFGSNFEEGKKIFELLKQLTLLTLEAMQTLYLPGFRFVPTAKNRRREKLNKEIKTMIRNLILRKENSMSNQENNADDLLCLLLQSKKKENQHEGDGLTIDEVMEECKQFYLAGQETVASYLTWTVIVLAMHSEWQEKARQEVLQICGKKEPNFESLSHFKIVTMILYEVLRLYPPVIGQYQHTYAETKIGEVLIPAGVDVTLPTLLIHHDPEYWGDDADQFKPERFSAGVSKASKDQLAFFPFGWGPKTCIGQNFAMLEAKVALAMILQNFSFELSPSYAHAPHTVMTLQPQHGAQLKIHQL | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 8864475 | 8867593 | + | Maker00021966 | Lcy2g0953 | 625718 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 201 | 219 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | E-class P450 group I signature | 86 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | Gene3D | Cytochrome P450 | 27 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | FunFam | Cytochrome P450 734A1 | 26 | 511 | - | - | |
| Lcy2g0953 | 511 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 13 | 503 | IPR050665 | GO:0004497(PANTHER) | |
| Lcy2g0953 | 511 | Pfam | Cytochrome P450 | 83 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | SUPERFAMILY | Cytochrome P450 | 81 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0953 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g0953 | Lcy-Chr2:8864475 | Lcy9g1423 | Lcy-Chr9:39233141 | 1.29E-172 | dispersed | |
| Lcy2g0953 | Lcy-Chr2:8864475 | Lcy9g0284 | Lcy-Chr9:7371433 | 5.62E-173 | transposed |
Pathway information