Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0978 | ATGGGGTCCATGGCTAGATTTCTGATCGCTTCTCTTCTTCTTCTTCTTCTTCCTTGTGTCTTCGTCAATGCCAAGAGAACCTACATTGTTCGCATGAAACATCATGCTCTTCCTTCTGATTATCCCACCCACCATGACTGGTACTCTGCTCATCTTCAATCTCTGTCCTCCTCCACCACTTCTGATTCCCTTCTCTACACCTACACTTCCGCCTACCATGGCTTTGCTGCTTCTCTGGATCCAGATGAAGCTGAATTGCTCCGCCAATCGGATTCTGTTCTGGGTGTCTATGAGGATACTGTTTACAACCTTCACACCACTCGAACTCCGGGATTCCTCGGGCTCGACTCGGATTTCGGCTTGTGGGAAGGTCACAACACTCAGGATCTCGACCAGGCTTCTCACGACGTCATCATTGGGGTTCTCGACACCGGGATTTGGCCGGAGTCGAAGAGCTTTGATGACACCGGAATGCCGGAGATCCCATCAAGGTGGCGTGGAGAGTGCGAATCTGGACCCGATTTCAGCCCTTCACTCTGCAACAAGAAACTAATCGGAGCTCGCAGCTTCTCGAAGGGTTATCAGATGGCTTCTGGTGGTGGGTACTTCCGAAAACCCAGAGAAAACGAGTCGCCTCGAGACCAGGACGGGCACGGCACTCACACAGCTAGCACGGCTGCTGGGTCGCATGTGGCTAACGCGAGCTTACTTGGGTATGCCAGAGGCATTGCTCGTGGGATGGCTCCTCAAGCGAGAGTTGCGGCTTACAAGACCTGTTGGCCCACTGGTTGCTTTGGATCTGACATTCTTGCCGGTATGGATCGGGCAATATCGGACGGTGTCGATGTACTCTCACTCTCTTTAGGTGGTGGCTCTGCGCCGTATTACCGGGATACCATTGCAATCGGAGCATTTGCGGCCATGGAAAAGGGGGTTTTTGTTTCGTGCTCAGCTGGGAACAGTGGGCCAAACAAGGCCTCTCTGGCCAATGTGGCACCGTGGATCATGACGGTCGGAGCCGGAACTCTGGACCGAGACTTCCCAGCTTATGTCCAACTCGGAAATGGGAAAAGGTTCACTGGAGTGTCGCTCTACAGTGGCCAAGGAATGGGGAACAAGCCGGTGGCTTTGGTGTACAACAAAGGAAGCAACACCTCCAGCAACATGTGCTTGCCCGGATCCCTTGAGCCGGCGTTGGTCAGAGGGAAGGTGGTGATCTGCGACAGAGGAATCAACGCCAGAGTAGAAAAGGGAGGAGTGGTGAGAGATGCAGGCGGCATTGGGATGATTCTGGCGAACACAGCCGCTAGTGGGGAGGAATTGGTGGCTGACAGCCACTTGCTGCCGGCCGTGGCGGTGGGGAGGAAAACCGGCGACTTGATCCGGCAGTACGTGCGGTCAGTTTCGAAGCCCACGGCGGTGCTGAGCTTTGGTGGGACAGTTTTGAACGTGCGCCCATCTCCAGTGGTGGCGGCCTTCAGTTCCAGAGGACCCAACTTGGTAACGCCCCAAATCCTAAAGCCTGACGTTATTGGGCCTGGCGTTAACATCTTGGCTGCCTGGTCTGAGTCCATTGGGCCTACTGGACTGGACAGTGACAAGAGGAAAACTCAGTTCAACATTATGTCAGGAACATCCATGTCTTGCCCACATATAAGTGGGCTGGCGGCATTGCTGAAGGCAGCTCATCCTGAATGGAGTCCAAGTGCTATCAAATCTGCGTTAATGACCACTGCATACACGCAGGACAACACCAACTCCTCTCTCAGGGATGCTGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCCCACAAAGCCCTCTCCCCTGGTCTTCTTTACGATATCTCGACCAATGATTACATTGCCTTCTTGTGCTCCTTGGACTATGGGATCGATCATGTTCAGGCGATTGTGAAGCGCACGAACATAACCTGCTCCAAAAAGTTTGCTGACCCAGGACAACTTAATTACCCTTCATTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGATACACTCGTCAAGTCACGAATGTCGGGGCTGCAGGGTCGGTTTATGATGTGGCTACTACTGCTCCATCAGTTGTGAAGGTGATCGTGAAACCCTCAAGGCTTGTGTTCACTAAAGTTGGGGAGAAGAAGAGGTACACTGTTACATTTGTGGCGAGCAGGGATGCTGCTCAAACCATGAGATTTGGATTTGGATCGATTGCATGGAGCAATAACCAACACCAAGTCAGAAGCCCAGTGGCATTCGCCTGGACAAGGTTGTGA | 2295 | 52.98 | MGSMARFLIASLLLLLLPCVFVNAKRTYIVRMKHHALPSDYPTHHDWYSAHLQSLSSSTTSDSLLYTYTSAYHGFAASLDPDEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDTGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKPVALVYNKGSNTSSNMCLPGSLEPALVRGKVVICDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSVSKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTNDYIAFLCSLDYGIDHVQAIVKRTNITCSKKFADPGQLNYPSFSVVFGSKRVVRYTRQVTNVGAAGSVYDVATTAPSVVKVIVKPSRLVFTKVGEKKRYTVTFVASRDAAQTMRFGFGSIAWSNNQHQVRSPVAFAWTRL | 764 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 9124001 | 9127509 | + | Maker00021941 | Lcy2g0978 | 625743 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0978 | 764 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 544 | 554 | IPR023828 | - | |
Lcy2g0978 | 764 | Gene3D | - | 631 | 761 | - | - | |
Lcy2g0978 | 764 | Pfam | PA domain | 377 | 460 | IPR003137 | - | |
Lcy2g0978 | 764 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 27 | 757 | IPR045051 | - | |
Lcy2g0978 | 764 | Pfam | Peptidase inhibitor I9 | 27 | 105 | IPR010259 | - | |
Lcy2g0978 | 764 | FunFam | Subtilisin-like protease SBT1.5 | 631 | 762 | - | - | |
Lcy2g0978 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 543 | 559 | IPR015500 | - | |
Lcy2g0978 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 134 | 153 | IPR015500 | - | |
Lcy2g0978 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 214 | 227 | IPR015500 | - | |
Lcy2g0978 | 764 | MobiDBLite | consensus disorder prediction | 198 | 225 | - | - | |
Lcy2g0978 | 764 | Pfam | Subtilase family | 135 | 584 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy2g0978 | 764 | Gene3D | Peptidase S8/S53 domain | 136 | 627 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy2g0978 | 764 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 118 | 614 | - | - | |
Lcy2g0978 | 764 | SUPERFAMILY | Subtilisin-like | 104 | 618 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy2g0978 | 764 | CDD | PA_subtilisin_like | 350 | 473 | - | - | |
Lcy2g0978 | 764 | Gene3D | - | 344 | 482 | - | - | |
Lcy2g0978 | 764 | FunFam | Subtilisin-like protease SBT1.9 | 19 | 105 | - | - | |
Lcy2g0978 | 764 | SUPERFAMILY | Protease propeptides/inhibitors | 26 | 104 | - | - | |
Lcy2g0978 | 764 | CDD | Peptidases_S8_3 | 102 | 580 | IPR034197 | - | |
Lcy2g0978 | 764 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 105 | IPR037045 | - | |
Lcy2g0978 | 764 | Pfam | Fibronectin type-III domain | 661 | 758 | IPR041469 | - | |
Lcy2g0978 | 764 | FunFam | Subtilisin-like protease SBT1.5 | 136 | 355 | - | - | |
Lcy2g0978 | 764 | FunFam | subtilisin-like protease SBT1.5 | 344 | 482 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0936 | Lcy-Chr1:8169958 | Lcy2g0978 | Lcy-Chr2:9124001 | 2.26E-286 | dispersed | |
Lcy2g0978 | Lcy-Chr2:9124001 | Lcy6g0219 | Lcy-Chr6:2004756 | 5.55E-273 | dispersed | |
Lcy13g2090 | Lcy-Chr13:39890109 | Lcy2g0978 | Lcy-Chr2:9124001 | 3.66E-160 | transposed | |
Lcy2g0978 | Lcy-Chr2:9124001 | Lcy3g2248 | Lcy-Chr3:49315876 | 4.76E-251 | wgd |
Pathway information
