Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0982 ATGGCTTGGGATTCGAGCAATGGCGGTGAAGTCGGAGCGGATAACTCTCTCCAGTCCATCTGTTACAAGCGCGGGTCCTTGCGGCTGCTCGATCAGAGGAAGCTCCCTCTGGAGACTGTTTACCTGGACATCAAGGATGCAACAGATGGATGGCATGCAATAAGGGATATGGTTGTACGTGGTGCACCGGCCATTGCTATTGCAGCAGCCCTTGCTTTGGCAGCAGAAGTGTACAACTCGAATGCTTTTAATGGGACGTCCAATGATGCAGCTTCCTTCATTGCAGAGAAACTGGACTACTTAGTCTCCAGCCGACCAACTGCTGTTAATCTTGGCGATGCTGCTATTAAACTTAAAGAAATTGTCTCTGAGGCTGCTGCTATTTCTTCTGAAGCCAAGAGTGTTGTCCAAGCGTATATAGAGGCTGCCGAAGCAATGCTGGAGGATGACGTTGCTTCAAATAAAGCCATTGGGTCCTATGGAGCAACTTATATCCGTGATCAACAAAAATCCTTGGAGAAGTTTTCCGTTCTAACGCATTGCAATACTGGCAGTCTAGCAACGGCTGGATATGGTACTGCCCTTGGTGTAATTCGTGCACTTCACTCTGCTGGTGTGTTAGAAAGGGCATACTGTACCGAAACACGGCCTTTTAATCAAGGATCCCGACTCACGGCCTATGAGTTGGTCCATGAAAAGATACCTTCTACTCTGATAGCAGATTCTGCTGCCGCCGCCTTGATGAAATTTGGAAGGGTGAATGCTGTTGTAGTTGGGGCTGATCGCGTAGCTGCAAATGGTGATACTGCAAATAAGATTGGAACCTATAGTCTTGCATTGTGTGCAATGCATCACAAGATTCCGTTCTTTGTGGCTGCACCATTGACTTCCATAGACTTATCCCTTTCTTCTGGAGAAGAAATTGTCATCGAGGAAAGGTCTCCCAAAGAGTTGTTGAACTCACGTGGAGGTCTCGGCGAGCAAGTCGCTGCATCTGGCATCGCTGTCTGGAACCCTGCTTTCGATGTTACTCCTGCTTATCTCATCGCAGGGATCATAACAGAAAAGGGAGTCATCACGAAGGCAGGTTCTGAATCTTTCAATATAAAGGAGTTCGTTCAAAAGACGGCAGGGACTCCTGCATAG 1146 47.73 MAWDSSNGGEVGADNSLQSICYKRGSLRLLDQRKLPLETVYLDIKDATDGWHAIRDMVVRGAPAIAIAAALALAAEVYNSNAFNGTSNDAASFIAEKLDYLVSSRPTAVNLGDAAIKLKEIVSEAAAISSEAKSVVQAYIEAAEAMLEDDVASNKAIGSYGATYIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKFGRVNAVVVGADRVAANGDTANKIGTYSLALCAMHHKIPFFVAAPLTSIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGIAVWNPAFDVTPAYLIAGIITEKGVITKAGSESFNIKEFVQKTAGTPA 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9147750 9154557 - Maker00022318 Lcy2g0982 625747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0982 381 Gene3D - 208 373 IPR042529 -
Lcy2g0982 381 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Lcy2g0982 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 44 361 IPR011559 GO:0044249(InterPro)
Lcy2g0982 381 SUPERFAMILY NagB/RpiA/CoA transferase-like 17 362 IPR037171 -
Lcy2g0982 381 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 14 376 - GO:0019509(PANTHER)|GO:0046523(PANTHER)
Lcy2g0982 381 FunFam Methylthioribose-1-phosphate isomerase 173 370 - -
Lcy2g0982 381 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237(InterPro)
Lcy2g0982 381 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
Lcy2g0982 381 Gene3D - 15 207 IPR027363 -
Lcy2g0982 381 FunFam Methylthioribose-1-phosphate isomerase 15 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0982 K08963 - csv:101210526 671.003