Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0986 ATGGCCCTCTCCATTTCTTCCACTGCGCTCTCAACTCTCCCAGTCAGAGAATCGTCCTACAGAGCACATTTTCCGGCGAGATATAGCCACCTCCGGCGAAATTCTTTTCATCTGAACGCCGCGAAATCCGGCGTGTCCAGCGTCTGTGAGCCGCTCCCTCCCGACCGACCCCTCTGGTTCCCCGGCAGCAGCCCGCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGATCCGCTTGGTTTGGGCTCCGACCCAGAGCTGCTAAAATGGTTCGCACAGGCGGAGCTAATGCACGCGAGATGGGCGATGCTAGCAGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAAAGCTTGGGACTGATCCAGAATTTCTCATGGTACGACGCCGGAACGCGGGAGTATTTTGCAGATCCGACGACATTACTGGTGGCGCAGTTGGCTCTGATGGGGTGGGTGGAGGGCCGGCGGTGGGCCGACATGCTCAACCCGGGCAGCGTGGACGTGGACCTCAAACTGCCCCACAAGAAGAAGCCGAAGCCCGACGTGGGGTACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGCAGGGGGTCGCCGGAGCCGGTAATGGTGCTGCGGACTAAGGAGATCAAGAACGGGCGGCTGGCGATGTTGGCGTTTGTGGGACTGTGGTTTCAGGCTATTTATACTGGCCAAGGGCCGCTCGAGAACCTGGCGGCGCATGTTGCAGATCCCGGCCACTGCAACATATTTTCGGCGTTTAGTTCAGGCTGA 786 60.31 MALSISSTALSTLPVRESSYRAHFPARYSHLRRNSFHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLALMGWVEGRRWADMLNPGSVDVDLKLPHKKKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSG 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9184473 9186949 - Maker00022767 Lcy2g0986 625751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0986 261 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Lcy2g0986 261 SUPERFAMILY Chlorophyll a-b binding protein 55 258 - -
Lcy2g0986 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 255 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Lcy2g0986 261 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
Lcy2g0986 261 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0568 Lcy-Chr2:4882718 Lcy2g0986 Lcy-Chr2:9184473 2.41E-67 dispersed
Lcy2g0986 Lcy-Chr2:9184473 Lcy7g0042 Lcy-Chr7:331102 2.41E-65 dispersed
Lcy2g0986 Lcy-Chr2:9184473 Lcy5g2537 Lcy-Chr5:48148995 4.26E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0986 K08908 - csv:101211430 476.863