Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1038 ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTCTCGTCAGAAACGTACAGTTTAGATGCTAATCTATGTCTTCTTCGCCTCTACCAGTTAGAGCCAGAAAGAATGAGTACTCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATGCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGACTGGTAAATTCCGTCAATTCTGGGATGAAGCTGCTAAGAACCGTCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATACAAGCTTATGCGGTCCATGTTCTTTCTTTAACTTATCAGAAGGTTCATAGATCTGTGCTTGCTGAGGTATGGATTTATAAAGCAGTTGTCTGCCATCTTATGTTGAATGATCTTGGAGTTGATAAGAGAAATTCGGACCCAATCATTGTTGCAACTACTTCCGAAGGTGTAGTCATGGCATGA 486 44.65 MGRELQKQPQQEMASAVSSETYSLDANLCLLRLYQLEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVTGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVHRSVLAEVWIYKAVVCHLMLNDLGVDKRNSDPIIVATTSEGVVMA 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10099540 10103048 + Maker00022805 Lcy2g1038 625803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1038 161 Gene3D ARM repeat; domain 1 4 125 IPR016020 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006446(InterPro)|GO:0043022(InterPro)
Lcy2g1038 161 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 10 73 IPR009374 GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)
Lcy2g1038 161 SUPERFAMILY ARM repeat 14 93 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1028 Lcy-Chr2:9916533 Lcy2g1038 Lcy-Chr2:10099540 2.08E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1038 K15028 - csv:101214255 213.001