Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1109 ATGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACCAAGACGAATCCAAATTGACATCGAACAAGCTCAAGCTCTTGTGCGTAAACTTGATGCTGAAAAAGGAGTAGAAGAAAATATTTTATGTGGTTCTGATAGTGACAAACTAGGTCGGGATAAAGCACACGGTAGCTCTTCTGGCCCAGTCATAATCATACGAGGGTTGACAACTGTCAAAGGCTTGGAGGGTGTTGAGCTACTGGACACGCTTCTCACATATCTTTGGCGCATCCATGGCTTAGATTACTATGGAATGGTTGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAGGAAGGAAAGAACTCTAACATGGCTGGTGGTGCGGATGAGTGGGAGAAGAAACTTGACTTGCGATGGCAAGAGAGATTGAGAGGTCAAGATCCGTTGGAAGCAATGACTGCCAAGGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGTAAAATAAGAGATGAAAAATATGGATGGAAGTATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCCCCTGAGTTTGTACATAAGCATCTTAACTTAAAACACCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAATGATGCAGATGCTCCTGGAGGGACACCTGTTATGCAACAATCACTTCCGAAAGACAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGATAGAGGCAATCGCAGGGACCGCGATAATTGGGCAAATGGGGGTGACAGATTCGATAGATCTGAGAACCCACAATCAAGTGATTTCCAATCAACAAATGATGGTACGGATGGTGGAAACCTTGATGATCCTATGTTTGATACTTTTGGAGGACCAGGCAGACATGTTGCTCCTTTTGCCTCTGAAATGCCACCGCCAGTGCTTATGCCTGTTCCTGGTGCTGGTCCATTAGGACCTTTCGTCCCTGCTCCACCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCTTTTGAGGGTGGTGGTAGAAATGGAAGGCCAGGACCTCAATTGGGTGGATCTGCTCCAATTCTTGCCCTATCTCCAGGTTTTCGGCAGGATCCTCGTCGAATTCGGAGGTATAACTCCTGTACAGATTTTAACCACTGGATATGGTTCTTTTTTCCCTTTTGTAATGTTGCTTTCATAGGCTTGCTTTTGTTCTATCAAGACCTAGATGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 1335 45.39 MDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDAEKGVEENILCGSDSDKLGRDKAHGSSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNMAGGADEWEKKLDLRWQERLRGQDPLEAMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMNDADAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSSDFQSTNDGTDGGNLDDPMFDTFGGPGRHVAPFASEMPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSPGFRQDPRRIRRYNSCTDFNHWIWFFFPFCNVAFIGLLLFYQDLDAPEDEVTVIDYRSL 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10982029 10990367 - Maker00022018 Lcy2g1109 625874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1109 444 ProSitePatterns Zinc finger C2H2 type domain signature. 183 206 IPR013087 -
Lcy2g1109 444 MobiDBLite consensus disorder prediction 285 299 - -
Lcy2g1109 444 MobiDBLite consensus disorder prediction 228 315 - -
Lcy2g1109 444 MobiDBLite consensus disorder prediction 245 277 - -
Lcy2g1109 444 Pfam Arsenite-resistance protein 2 117 319 IPR007042 -
Lcy2g1109 444 PANTHER ARSENITE-RESISTANCE PROTEIN 2 7 440 IPR039727 GO:0006397(InterPro)|GO:0016604(PANTHER)|GO:0031053(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1109 K27103 - csv:101219335 744.962