Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1118 ATGGCGGCGGAGACGGTGACCGTGGCGGCAGTGGCGGTGGCGGTCGTGGCGGCCGGGTGGTTGTTATGTGGTGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAAAACACTTGGACAACTAATATTAACTTCACTGATTGGTCAATTCATGAGCACTTTTATGTTGGTGATTGGCTTTATTTCGGGTTCGATAAACACATCTACAACGTGCTAGAAGTGAACAAAACGAGCTACGAGAATTGCATCGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGGGATGTGTTCAACCTAACAGAAGCAAAGCCATACTACTTTCTAAGTGGAGGAGGCTTTTGTTTTCAAGGAATGAAGCTTGCTGTCTTTGTTGAAGATTTTCCCACTTCTTCTCCCATTTCACCACCAAAATTACCCAAAATTTCCAATCTTTCTCCATCTATACAACCATTATTATCTTTGCCCTTCTTGCTACTCACCATTGCCTTCACTTCCTTCCTTTAG 519 44.51 MAAETVTVAAVAVAVVAAGWLLCGVEGRQPVLHRVGGGKNTWTTNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYENCIDKDFIFNITRGGRDVFNLTEAKPYYFLSGGGFCFQGMKLAVFVEDFPTSSPISPPKLPKISNLSPSIQPLLSLPFLLLTIAFTSFL 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11072245 11073664 + Maker00022470 Lcy2g1118 625883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1118 172 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055(InterPro)
Lcy2g1118 172 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055(InterPro)
Lcy2g1118 172 PANTHER BLUE COPPER PROTEIN 15 130 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lcy2g1118 172 FunFam Lamin-like protein 29 132 - -
Lcy2g1118 172 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Lcy2g1118 172 Gene3D - 31 133 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0682 Lcy-Chr10:20093575 Lcy2g1118 Lcy-Chr2:11072245 1.23E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1118 - - - 0.0