Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1134 ATGTTAGATGAGTGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAACCCTAATGACATCCTTGCACTCCGATTTTGGGCCTCTTATCGGGGACAGACATTAGCAAGAACTGTTCGTGGAATGATGTACTATCGGAAAGCTCTTATGCTGCAGACTTATCTAGAAAGAGGAATTTATGGAGATTTGGAAGCTGCCATTCCTTCTACTGATGCTATTGATACTCGGGGTTTTGATTTATCTCCTGAAGCACGTGCACAGGCAGATCTTAAGTTTACATATGTAGTAACGTGTCAGATATATGGAAAACAAAGAGAACAACGAAAACCAGAGGCCTCCGATATTGCATTGCTGATGCAAAAAAATGAAGCTCTTCGTGTTGCCTACATTGATGATATTGAAACCCTAAAGGATGGTAAGGTGCACAAAGAATTTTACTCGAAGCTTGTGAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCCATCAAATTGCCTGGAGATCCAAAATTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTATTGTTTTTACTCGTGGAAATGCTGTTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTTGAGGAATTTGGTTGTGATCATGGTATTCGTCCTTCTACCATATTGGGTGTCAGGGAACATGTCTTTACGGGGAGTGTTTCATCTCTTGCCTCATTCATGTCTTATCAAGAAGCTAGTTTTGTGACTCTTGGTCAGCGTGTTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGGGTTTTCCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGCGTTATCAACATTAGTGAAGATATCTTTGCAGGATTTAATACAACCTTGCGGCAAGGAAACGTTACTCATCATGAGTATATTCAGGTTGGTAAAGGACGAGATGTTGGTCTTAATCAGATTGCTCTTTTCGAAGGGAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATACAGGCTTGGCCAACTATTTGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACCATGTTAACTGTGCTGACTGTCTACATTTTTCTCTACGGTAAAGCATATTTGTCGTGTGTTTGCAGTGCTCATTTGCATCCTTTCGTTGCTACGAGTTCACATCCTTCTGTCGCCACTCATCCATTTTTCACTGTTGCTTGTTCATTTGCCTGCCGCTCATCTGATGTTGTCTGTTCACCCATTTGTGTTGTCTGTGTTGGTGAGACCATTGAAGATAGAGCTAATATTACAGATAATACTGCATTGTCAGCTGCTCTGAATACACAGTTCCTCATCCAAATTGGTATCTTCACTGCTGTGCCCATGATCTTGGGTTTCATATTGGAGCAAGGTTTCTTCAGGGCCATTGTCAGCTTCATAACCATGCAGCTTCAACTTTGTTCTGTCTTCTTCACATTCTCTCTTGGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCGAAGTATCATGCCACTGGAAGGGGATTTGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGACTCTACTCCCGCAGCCATTTTGTCAAAGGATTGGAAGTTGTGCTTCTGTTGGTAGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTCACTCTTAGCAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTACCTGTTCAATCCATCTGGGTTTGAGTGGCAAAAGACCGTGGAGGATTTCAGAGAATGGACCAATTGGCTTTTTTACCGTGGTGGAATTGGTGTTAAGGGTGAAGAAAGCTGGGAAGCATGGTGGGACTCAGAACTGGTATATGGGTTCTCCTGGATTGTGTTAGCTGGGCTTATAGTTCTTTTCAAGGTGTTTACCTTTAGTCAGAAGATGACTGTCAATTTCCAGCTTTTGTTGCGTTTTATCCAAGGTCTTTCTTTCCTTTTGGCGCTGGCTGGCCTGGCAGTTGCGGTTGCTATTACAGACTTGTCATTGCCTGATGTATTTGCTTGCATCTTGGCATTTGTACCAACAGGATGGGGCATTCTCTGTATTGCAGCAGCTTGGAAACCTTTGATTAAGAGACTGGGACTCTGGAAATCCATCCGCTCAATTGCTCGGCTGTACGATGCCGGGATGGGGATGCTTGTCTTCATCCCCATTGCATTTCTTTCTTGGTTTCCATTTGTATCAACATTCCAAACTCGTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCGAGATCTCACTCATTCTTGCTGGAAACAATCCCAACACTGCCCTGTGA 2442 42.59 MLDEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGIYGDLEAAIPSTDAIDTRGFDLSPEARAQADLKFTYVVTCQIYGKQREQRKPEASDIALLMQKNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFGCDHGIRPSTILGVREHVFTGSVSSLASFMSYQEASFVTLGQRVLANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLSCVCSAHLHPFVATSSHPSVATHPFFTVACSFACRSSDVVCSPICVVCVGETIEDRANITDNTALSAALNTQFLIQIGIFTAVPMILGFILEQGFFRAIVSFITMQLQLCSVFFTFSLGTKTHYFGRTILHGGAKYHATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLVVYMAYGYSSGGSLAYILVTLSSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGIGVKGEESWEAWWDSELVYGFSWIVLAGLIVLFKVFTFSQKMTVNFQLLLRFIQGLSFLLALAGLAVAVAITDLSLPDVFACILAFVPTGWGILCIAAAWKPLIKRLGLWKSIRSIARLYDAGMGMLVFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTAL 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11315198 11335089 - Maker00022180 Lcy2g1134 625899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1134 813 Pfam 1,3-beta-glucan synthase component 456 652 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Lcy2g1134 813 Pfam 1,3-beta-glucan synthase component 26 410 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Lcy2g1134 813 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 657 807 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0083 Lcy-Chr2:645247 Lcy2g1134 Lcy-Chr2:11315198 1.83e-313 dispersed
Lcy2g0084 Lcy-Chr2:659736 Lcy2g1134 Lcy-Chr2:11315198 5.87E-44 dispersed
Lcy2g1134 Lcy-Chr2:11315198 Lcy8g0170 Lcy-Chr8:4009348 1.95E-288 dispersed
Lcy2g1134 Lcy-Chr2:11315198 Lcy9g1429 Lcy-Chr9:39266574 2.34E-262 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1134 K11000 - csv:101216435 1451.03