Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1135 ATGGCGGGAAAAATCGAAGGAGCTTTAGATTCGATGGTCGTAGAAGGGAAGGGAGAAACAGTGGAAGCGATAGACACGATTGAGGAAGAGTCATCTCAATGCAAGAGAGTTGGAGAAGAAAGCAGAAGACACAAGTTGATCGGGGCTAAAGAGCACAAAGACCTGTCCAGTCTTCAACAACCGCGGCAAAGGAGAAGCGCAACGACGAAGCTAATGCTACATCCGAGAAGGAATCAGGCTGAACGCAAGTTTGAATATTTGAGTGAGAACCAAATCCAGGCACTGCTGACAGTGGGGTTTCTCGAACCTGAAGACCACAAACATCAAGAAATGAAGAGAATTTCCTTATGCCTGGAGAGAGAGAGAGGGGCTAAAGTTTGCTCTATTTACATCTTGGACATTCATGTGTTCTATACTGTTATCTCTGCTATTTGGAGTTTCTTAATTGGGGCAAGAGATCGTCTTGGAGAGATTAGATCACTGGAAGCCGTTCATAAACTGTTTGAGCAGTTTCCTGAAGCTTTTATGAACACTCTACATGTTCCTCTTCCAGAAAGGATTTCTAATCGTTCTTCAAGTCAGATTGACGTGTCTGTAGTGTCATTTTGTCCTCATATCAGCCTAGGACATGCTACCAGAAAATTGGCGTATGCATGCATTGTAGGTTTTAAAATGCTATTGCAACTTGAGATTATATTTGCTGATGTTTGTGTCAAGGTTGTTGAGAAAGAGAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTGCTTCAAATGCCTAAAAACAAGGGTAATCTTCCCATGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTGAGAAACGAGATTCGCAATACGAGTTGTGGGAGCGTATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGCTACCATGCAATTAAGCTTATCTTAACAGAATTACTGGTCGGGGAAGGAAGGATGTGGGTTGAAAGGGTATTTGAAGACATTCAAACTAGCGTAGCTAGCAATTCCATTCTAAATGACTTCCAGCTAAATAAGCTGCCACTTGTGATTACAAGAGTAACTGCTCTGACGGGTATTCTGGAATCCAATGTTGGTCGGTATTTACTTGAGAAAAGCATGAGGGACTTCTTGGGAGGGATAGGTAAAGGAAAAGGGTCTAACCTCTTGAATTTTGAGTGTGGTGATGAAGCCAGGCATTGTGTAGCTTGGCCTAGAGTTTGTAGTTCAATGATCGAGGAGTCATTGCCTCATCCGCCCTTTAGGATAAAGGGACCTGTTTTTGTGGTGGTCAAAGTCATTGTATTTTTTACTCATGTATCTTCTGTTTTTCACTTTGATTATGACATTGTACAGAAAGAGCCAGAAACTTCGGAACTGGAAAAAGGTGCTGTTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATATCCTTTTCGGTGACAAGAGGGGGCACTATGAAACATGGAACATATTGGTAAAAGCCAGAAATGAAGGTCGCCTGTTTACAAAGTTGAATTGGCCCAAAGATCCAGAATTGAAGGCACAAGTCAAAAGATTGCATTCGCTGTTAACCATTAAAGATTCAGCTTCAAATATTCCAGTTAATCTTGAGGCCAGACGTAGACTGCAATTCTTTACAAATTCACTTTTCATGAGGATGCCAACCCCAAAACCTGTTCGTCAGATGCTTTCCTTCAGGTAG 1803 41.43 MAGKIEGALDSMVVEGKGETVEAIDTIEEESSQCKRVGEESRRHKLIGAKEHKDLSSLQQPRQRRSATTKLMLHPRRNQAERKFEYLSENQIQALLTVGFLEPEDHKHQEMKRISLCLERERGAKVCSIYILDIHVFYTVISAIWSFLIGARDRLGEIRSLEAVHKLFEQFPEAFMNTLHVPLPERISNRSSSQIDVSVVSFCPHISLGHATRKLAYACIVGFKMLLQLEIIFADVCVKVVEKEKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNKGNLPMVQWPLFLLASKIFLAKDIAVEKRDSQYELWERISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERVFEDIQTSVASNSILNDFQLNKLPLVITRVTALTGILESNVGRYLLEKSMRDFLGGIGKGKGSNLLNFECGDEARHCVAWPRVCSSMIEESLPHPPFRIKGPVFVVVKVIVFFTHVSSVFHFDYDIVQKEPETSELEKGAVKAVQDLYDVVHHDILFGDKRGHYETWNILVKARNEGRLFTKLNWPKDPELKAQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMRMPTPKPVRQMLSFR 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11339145 11349342 - Maker00022279 Lcy2g1135 625900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1135 600 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 126 599 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lcy2g1135 600 MobiDBLite consensus disorder prediction 50 69 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1135 Lcy-Chr2:11339145 Lcy2g1151 Lcy-Chr2:11496659 2.95E-41 dispersed
Lcy2g1135 Lcy-Chr2:11339145 Lcy3g1948 Lcy-Chr3:46649362 2.21E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1135 K11000 - csv:101216435 371.318