Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1149 ATGATGGTATTAGATACCCCTCAATTCTTGGACTTCGAGAGCATATATTTACTGGAAGGCAAATTCTCTCATTTCTCTCTCTCTCGAGCCTTTATTATTACTATTATTATTATTATTATTATTATTTGCTTCACATGGCCAGTTGTATGCTTTCTTCATTGTTCTTCTGTTTCTGAATGCAGTGTTTCTTCGCTTGCTTGGTTCATGTCTAATCAAGAAACAAGTTTTGTTACCATTGGTCAGAGACTTTTGGCCAATCCTCTGAAGGTTCGCTTCCACTATGGGCATCCAGATGTGTTTGATAGGCTCTTCCACCTAACTAGAGGAGGTGTCAGTAAAGCTTCCAAGGTTATCAATTTGAGCGAAGACATATTTGCTGGTTTCAATTCAACCCTTCGTGAAGGCAATGTCACTCATCATGAGTACATACAAGTTGGAAAAGGAAGAGATGTGGGACTTAATCAGATTTCAATGTTTGAAGCAAAAATAGCAAATGGGAATGGGGAGCAGACACTAAGTCGGGATATATACCGGCTTGGACACCGATTTGACTTCTTCCGAATGTTATCTTGTTATTTTACCACTATCGGATTCTATTTTAGTACTCTGATAACTGTTCTCACAGTATATGTATTCCTTTATGGTCGTCTTTATCTTGTTCTTAGTGGACTTGAAAAAGGTTTGAGCACTCAACCAGCTATTCGAGACAATAAACCTCTGCAAGTAGCCCTTGCTTCTCAATCTTTTGTCCAGATTGGATTCTTGATGGCCTTGCCTATGCTGATGGAGATTGGTTTGGAAAGAGGATTCCGCACAGCATTGAGTGAATTCATATTGATGCAATTACAACTTGCTCCCGTCTTTTTTACTTTCTCTCTTGGGACAAAGACCCACTATTATGGGAGGACTTTACTTCATGGAGGCGCCAAGTATAGGCCTACAGGTCGTGGTTTTGTGGTGTTTCACGCCAAGTTTGCTGATAACTACAGGCTCTACTCCCGTAGCCACTTCGTCAAAGGTCTTGAGCTCATGATTTTACTTCTTGTGTACCAGATATTTGGTCACACTTACAGAAGTGCAGTAGCTTATGTGTTGATTACTGTATCCATGTGGTTTATGGTCGGCACTTGGCTGTTTGCTCCCTTTCTCTTTAACCCTTCTGGTTTTGAGTGGCAAAAGATTGTCGATGATTGGACGGATTGGAATAAATGGATTAGTAATCGTGGTGGGATTGGTGTTCCACCAGAAAAAAGTTGGGAATCATGGTGGGAGGAAGAACAAGAGCACTTACGCCACTCTGGAAAGCGCGGTTTAGTAGCTGAGATATTATTAGCTTCTCGGTTCTTTATCTATCAGTATGGTCTTGTCTATCATCTTAGCATTACTCAGCGCACAAATACTAAAAGTTTCCTGGTAAATCAACCACTTGATGTTCTATCCACCTCCTTTCGTATACGGCATATCATGGCTGGTGATCTTTCTAATACTGTTTGTAATGAAGACTGTTTCGGTTGGAAGGCGAAAGTTCAGTGCAGATTTCCAACTCGTGTTCCGTCTGATCAAGGGGTTAATTTTCCTAACATTCGTCTCCATTCTCGTCACGTTGATTGCTCTTCCTCATATGACAGTGCAGGACATCATTGTTTGCATACTTGCTTTCATGCCAACGGGTTGGGGTATGCTTTTGATTGCACAAGCATTGAAACCGCTCGTCCATCGAGCTGGCTTCTGGGGATCCGTAAGGACACTCGCTCGTGGTTACGAGATCATCATGGGTTTGCTTCTGTTCACTCCTGTCGCATTCCTTGCCTGGTTTCCATTCGTATCAGAATTCCAGACCCGTATGCTCTTCAACCAAGCGTTCAGCAGAGGTTTGCAAATTTCTCGTATTCTTGGCGGTCATCGGAAGGACCGCTCGTCCCGAAACAAGGATTAAGAACACTGTAA 1947 42.22 MMVLDTPQFLDFESIYLLEGKFSHFSLSRAFIITIIIIIIIICFTWPVVCFLHCSSVSECSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYVFLYGRLYLVLSGLEKGLSTQPAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGLELMILLLVYQIFGHTYRSAVAYVLITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLRHSGKRGLVAEILLASRFFIYQYGLVYHLSITQRTNTKSFLVNQPLDVLSTSFRIRHIMAGDLSNTVCNEDCFGWKAKVQCRFPTRVPSDQGVNFPNIRLHSRHVDCSSSYDSAGHHCLHTCFHANGLGYAFDCTSIETARPSSWLLGIRKDTRSWLRDHHGFASVHSCRIPCLVSIRIRIPDPYALQPSVQQRFANFSYSWRSSEGPLVPKQGLRTL 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11482811 11487573 - Maker00022192 Lcy2g1149 625914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1149 648 Pfam 1,3-beta-glucan synthase component 61 438 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Lcy2g1149 648 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 61 472 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1149 Lcy-Chr2:11482811 Lcy9g1429 Lcy-Chr9:39266574 1.39E-207 dispersed
Lcy2g1149 Lcy-Chr2:11482811 Lcy3g1947 Lcy-Chr3:46639335 5.33E-207 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1149 K11000 - csv:101216678 815.453