Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1159 ATGAGGCCTGTCAAACGCGAACCCGTCGCCAGCAGCCGCAGTAATCGGAGTACAGGCGGCAGCGCCGACGATGCTGCGATTTTAAGGGATGTTAAGCGGGAGAGGGTTGCTAGGGAGCGAGAGAACTCCCACGAGGACAACACCACTGAAGAAGAAGAGGGTCAGCAAGACTTGTCGAAGCGGCGGGTCCTTCGGTCTCGGTACCTCGCGGTCATTCATGAGATTAGTGAAAGGAGAGAGGATTTGTCGAAGGATTTGGATAAGTTTAATGTTATCATCAGTGAGGTGGAAAAGTTGCACGAGCAAGTTCAGAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAGGATATTGCAAACTCCCTCGTGACATCTATTAGGTCCCAGTCCAATGAAGGTGTTACTCCATCAGATTTTGTTAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTAACATCTAGAGAAAACGATCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGGTGCCGCACCATGCTTGGACCTATGAGTACTCAGTTGAAGCAGCGAAAGACTGTTACCAGGAAGCGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGAAAATGCGTCTGAAGAAAAAACAGATACAGATAAGAACATGAGCATCATGTTTCTGATTTTGAGGAGGAATAAAACCGTTAAACTTGAACATTTGATATTGAATAGAAAGTCTTTTGCACAGACGGTAGAGAACTTATTTGCTCTATCCTTTCTGGTTAAGGATGGTCGTGCTGAGATAACTATTGATAAAAACGGCCGTCATCTTGTGTCACCGAAGAATGCCCCTGCCCATAGTGCTATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTTCAAGGATTGGAAGCTGATGATGGATATGGTACCAGTTGGAGAGGAGCTGATGCCTCACAGGAATTTTCTGAATTCAGCACCAATGCCCCAAGCAGAGGCATCAGGGGATGATTCCGAAGCAGCAGCATTGCCTACCACGCCAATTCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATGCAGTCTGTTGTTGAGGATTCTCCTGATAATGGCACTGATTCAGGACCAACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGTTTAGTAAATTAG 1215 45.19 MRPVKREPVASSRSNRSTGGSADDAAILRDVKRERVARERENSHEDNTTEEEEGQQDLSKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIISEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVTSRENDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSTQLKQRKTVTRKRSRPTESSRPAEVEENASEEKTDTDKNMSIMFLILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGRHLVSPKNAPAHSAIMSHEVNYSHFVFRFDFKDWKLMMDMVPVGEELMPHRNFLNSAPMPQAEASGDDSEAAALPTTPIRKLSRNRGLVMQSVVEDSPDNGTDSGPTAILRCKRKLSQGLVN 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11611646 11614698 - Maker00022462 Lcy2g1159 625924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1159 404 Pfam Nse4 C-terminal 243 330 IPR014854 -
Lcy2g1159 404 MobiDBLite consensus disorder prediction 1 59 - -
Lcy2g1159 404 MobiDBLite consensus disorder prediction 26 59 - -
Lcy2g1159 404 MobiDBLite consensus disorder prediction 340 360 - -
Lcy2g1159 404 PANTHER UNCHARACTERIZED 34 370 IPR027786 GO:0005634(PANTHER)|GO:0005634(InterPro)|GO:0006281(PANTHER)|GO:0006281(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Lcy2g1159 404 MobiDBLite consensus disorder prediction 202 224 - -
Lcy2g1159 404 MobiDBLite consensus disorder prediction 190 224 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1159 K22825 - csv:101220149 653.669