Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1252 | ATGGCAGCCAGTGCCCTAGCTCTGTCTTCTTCAACCTTTCTTCTGGCTCTTTGTAAGAGCTTCATGATCTTCTTGACTGGCTCATTCATGGCGGCTGTTCTCATCTGGTTGTTTTCCCATTATGAGAAAAGAAAGCAGTCCTTTGGCACTGCACCTCTCCCACCCGGCCCGTCTCCGTGGCCTCTCGTCGGCTGCCTCCCGACGATATGGCGGAGGAAGCCGAGATACCGATGGATTCACAAGGTCATGGAAGAGCTAAACACCGAAATCGCATGCATCCGTCTCGGCAGAACCCATGTCATTCCCGTGAGGTCTCCAGAACTCGCCGTCGAGTTTCTGAAGACGCACGACTCTCTATTTGCTTCACGACCGGTCACCGTCATCACCAACATGTTCAGTGACGGGTTCCTCAGCGCAGGCGTCACGCCGTGGGGAGACCAATGGAGGAAGATGAGAAGAGTCCTCACGTCGGAAATCCTGAGTCCGGCTCGACACCGGTGGATGCTCGCAAAGAGAACTGAAGAAGCCGACAATCTCCTACGGTACGTGTTCCATTTAACGACGGCGAACGACGACGGCAGGGGCGGGGCAGTGGTTAACCTGAGAAGCATAACACGGCATTATTTGGGGAACGTGATGCGTCAAATAATGTTCGGTAGGCGATACTACGGCGGAGGAAGAGCGGACGGGGGGCCGGCGGCGGAGGAAGAAGAGCATATCGGAGCATTGTTTACGATTCTTCAACATGTTTATGCAATTTGTGTATCGGATTACATGCCGTGTTTGAAGGTGTTTGATTTGGATGGTCACGAGAGGACTGTTAAGAAGGCTTTGAATGTTATTAGAAAGTATGAAGAGCCGATCATTGAGGAGAGAGTGCAGCAATGGAGAGATGGGAGGAGGACGGAGGCTGAGGACATGTTGGATATCTTCATCTCGCTCAAAGATGGCGATGGGAAGCCATTGTTGTCAGTCAGGGAGATTAAAGCACAGATTACGATACCCGAGTATCTCGAGATGTCCGAGTATCCTAGAATGCCCATACGGGAGGAACTGCTTCTCGCAACAGTGGACAATCCATCGAACGCAGTGGAATGGGCCATAGCAGAGATGCTAAACCAGCCCCAAATCCTCCAAACCGCCATCGAAGAACTCGACAGAGTCGTCGGAAAACAGCGCCTCGTCCAAGAATCCGACCTCCGAAATCTCAAATTCCTCACCGCCTGCGCCAGAGAGGCCCTCCGCCTCCACCCAATCGCCCCCTTCAACCTCCCTCACATCGCCATCGTCGACGCCGTCGTCGCCGGCTACTTCATCCCCGCCGGCAGCCACGTCCTCCTAAGCCGCCTCGGACTCGGCCGGAACCCTAGGGTTTGGCCCGACCCGATGCGATACGATCCGAACAGACATCTCCAAGATCCGGGCGCCGATCCCGACCTAGGGGAGCCCGATCTGAGGTTTATTACATTCACCAGAGGGCGGAGAGGGTGTATGGGCGGCAAGCTTGGGACTGCCATTACAATGATGCTGTTGGCTAGGCTTGTGCAGGGATTTTCTTGGCGGTTGCCGCCCGGTGTGGCGGCGATTGACCTGTCAGAGTCTGACCAATTGTTTATGAAGAATCCTCTGTTCCCGTTTGCAGAGCCGCGACTGTCGGAATCTCTGTACCCTGATTCCGAAACACAGGGGAGAAACTTGTTTTAA | 1704 | 54.23 | MAASALALSSSTFLLALCKSFMIFLTGSFMAAVLIWLFSHYEKRKQSFGTAPLPPGPSPWPLVGCLPTIWRRKPRYRWIHKVMEELNTEIACIRLGRTHVIPVRSPELAVEFLKTHDSLFASRPVTVITNMFSDGFLSAGVTPWGDQWRKMRRVLTSEILSPARHRWMLAKRTEEADNLLRYVFHLTTANDDGRGGAVVNLRSITRHYLGNVMRQIMFGRRYYGGGRADGGPAAEEEEHIGALFTILQHVYAICVSDYMPCLKVFDLDGHERTVKKALNVIRKYEEPIIEERVQQWRDGRRTEAEDMLDIFISLKDGDGKPLLSVREIKAQITIPEYLEMSEYPRMPIREELLLATVDNPSNAVEWAIAEMLNQPQILQTAIEELDRVVGKQRLVQESDLRNLKFLTACAREALRLHPIAPFNLPHIAIVDAVVAGYFIPAGSHVLLSRLGLGRNPRVWPDPMRYDPNRHLQDPGADPDLGEPDLRFITFTRGRRGCMGGKLGTAITMMLLARLVQGFSWRLPPGVAAIDLSESDQLFMKNPLFPFAEPRLSESLYPDSETQGRNLF | 567 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 13284109 | 13287674 | - | Maker00022351 | Lcy2g1252 | 626017 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1252 | 567 | Pfam | Cytochrome P450 | 54 | 541 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 30 | 555 | IPR051382 | - | |
| Lcy2g1252 | 567 | SUPERFAMILY | Cytochrome P450 | 54 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 407 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 448 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 208 | 226 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 108 | 129 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 487 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 364 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | PRINTS | E-class P450 group I signature | 497 | 520 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1252 | 567 | Gene3D | Cytochrome P450 | 39 | 545 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1252 | Lcy-Chr2:13284109 | Lcy2g1257 | Lcy-Chr2:13375271 | 0 | dispersed | |
| Lcy2g1252 | Lcy-Chr2:13284109 | Lcy2g1253 | Lcy-Chr2:13306451 | 4.37E-105 | tandem | |
| Lcy2g1252 | Lcy-Chr2:13284109 | Lcy4g1576 | Lcy-Chr4:39793760 | 1.75E-39 | wgd |
Pathway information