Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1252 ATGGCAGCCAGTGCCCTAGCTCTGTCTTCTTCAACCTTTCTTCTGGCTCTTTGTAAGAGCTTCATGATCTTCTTGACTGGCTCATTCATGGCGGCTGTTCTCATCTGGTTGTTTTCCCATTATGAGAAAAGAAAGCAGTCCTTTGGCACTGCACCTCTCCCACCCGGCCCGTCTCCGTGGCCTCTCGTCGGCTGCCTCCCGACGATATGGCGGAGGAAGCCGAGATACCGATGGATTCACAAGGTCATGGAAGAGCTAAACACCGAAATCGCATGCATCCGTCTCGGCAGAACCCATGTCATTCCCGTGAGGTCTCCAGAACTCGCCGTCGAGTTTCTGAAGACGCACGACTCTCTATTTGCTTCACGACCGGTCACCGTCATCACCAACATGTTCAGTGACGGGTTCCTCAGCGCAGGCGTCACGCCGTGGGGAGACCAATGGAGGAAGATGAGAAGAGTCCTCACGTCGGAAATCCTGAGTCCGGCTCGACACCGGTGGATGCTCGCAAAGAGAACTGAAGAAGCCGACAATCTCCTACGGTACGTGTTCCATTTAACGACGGCGAACGACGACGGCAGGGGCGGGGCAGTGGTTAACCTGAGAAGCATAACACGGCATTATTTGGGGAACGTGATGCGTCAAATAATGTTCGGTAGGCGATACTACGGCGGAGGAAGAGCGGACGGGGGGCCGGCGGCGGAGGAAGAAGAGCATATCGGAGCATTGTTTACGATTCTTCAACATGTTTATGCAATTTGTGTATCGGATTACATGCCGTGTTTGAAGGTGTTTGATTTGGATGGTCACGAGAGGACTGTTAAGAAGGCTTTGAATGTTATTAGAAAGTATGAAGAGCCGATCATTGAGGAGAGAGTGCAGCAATGGAGAGATGGGAGGAGGACGGAGGCTGAGGACATGTTGGATATCTTCATCTCGCTCAAAGATGGCGATGGGAAGCCATTGTTGTCAGTCAGGGAGATTAAAGCACAGATTACGATACCCGAGTATCTCGAGATGTCCGAGTATCCTAGAATGCCCATACGGGAGGAACTGCTTCTCGCAACAGTGGACAATCCATCGAACGCAGTGGAATGGGCCATAGCAGAGATGCTAAACCAGCCCCAAATCCTCCAAACCGCCATCGAAGAACTCGACAGAGTCGTCGGAAAACAGCGCCTCGTCCAAGAATCCGACCTCCGAAATCTCAAATTCCTCACCGCCTGCGCCAGAGAGGCCCTCCGCCTCCACCCAATCGCCCCCTTCAACCTCCCTCACATCGCCATCGTCGACGCCGTCGTCGCCGGCTACTTCATCCCCGCCGGCAGCCACGTCCTCCTAAGCCGCCTCGGACTCGGCCGGAACCCTAGGGTTTGGCCCGACCCGATGCGATACGATCCGAACAGACATCTCCAAGATCCGGGCGCCGATCCCGACCTAGGGGAGCCCGATCTGAGGTTTATTACATTCACCAGAGGGCGGAGAGGGTGTATGGGCGGCAAGCTTGGGACTGCCATTACAATGATGCTGTTGGCTAGGCTTGTGCAGGGATTTTCTTGGCGGTTGCCGCCCGGTGTGGCGGCGATTGACCTGTCAGAGTCTGACCAATTGTTTATGAAGAATCCTCTGTTCCCGTTTGCAGAGCCGCGACTGTCGGAATCTCTGTACCCTGATTCCGAAACACAGGGGAGAAACTTGTTTTAA 1704 54.23 MAASALALSSSTFLLALCKSFMIFLTGSFMAAVLIWLFSHYEKRKQSFGTAPLPPGPSPWPLVGCLPTIWRRKPRYRWIHKVMEELNTEIACIRLGRTHVIPVRSPELAVEFLKTHDSLFASRPVTVITNMFSDGFLSAGVTPWGDQWRKMRRVLTSEILSPARHRWMLAKRTEEADNLLRYVFHLTTANDDGRGGAVVNLRSITRHYLGNVMRQIMFGRRYYGGGRADGGPAAEEEEHIGALFTILQHVYAICVSDYMPCLKVFDLDGHERTVKKALNVIRKYEEPIIEERVQQWRDGRRTEAEDMLDIFISLKDGDGKPLLSVREIKAQITIPEYLEMSEYPRMPIREELLLATVDNPSNAVEWAIAEMLNQPQILQTAIEELDRVVGKQRLVQESDLRNLKFLTACAREALRLHPIAPFNLPHIAIVDAVVAGYFIPAGSHVLLSRLGLGRNPRVWPDPMRYDPNRHLQDPGADPDLGEPDLRFITFTRGRRGCMGGKLGTAITMMLLARLVQGFSWRLPPGVAAIDLSESDQLFMKNPLFPFAEPRLSESLYPDSETQGRNLF 567
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 13284109 13287674 - Maker00022351 Lcy2g1252 626017
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1252 567 Pfam Cytochrome P450 54 541 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 30 555 IPR051382 -
Lcy2g1252 567 SUPERFAMILY Cytochrome P450 54 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 448 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1252 567 Gene3D Cytochrome P450 39 545 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1252 Lcy-Chr2:13284109 Lcy2g1257 Lcy-Chr2:13375271 0 dispersed
Lcy2g1252 Lcy-Chr2:13284109 Lcy2g1253 Lcy-Chr2:13306451 4.37E-105 tandem
Lcy2g1252 Lcy-Chr2:13284109 Lcy4g1576 Lcy-Chr4:39793760 1.75E-39 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1252 - - - 0.0