Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1257 ATGGCAGCCAGTGCCCTAGCTCTGTCTTCTTCAACCTTTCTTCTAGCTATTTGCAAGAGCTTCATGATCTTCTTGACTGGCTCATTCATGGCAGCTGTTCTCATCTGGTTGTTTTCCTATTATGGGAAAAGAAAGCAGTCTGTAGGCACTGCAGCTCTCCCACCCGGTCCGTCTCCATGGCCGATCGTCGGCTGCCTCCCGACGATATGGCGGAGGAAGCCGAGATACCGATGGATTCACAGCGTCATGGAAGACCTAAACACCGAAATCGCTTGCATCCGTCTCGGCAAAACCCATGTCATTCCTGTGATGTCTCCAGAACTCGCCGTCGAGTTTCTAAAGACGCACGACTCTCTATTTGCGTCGCGACCGATCACCGTCACCACCGACATGTTCAGCGACGGGTTCCTCACGGCAGGCGTCGCGCCGTGGGGAGACCAATGGAGGAAGATGAGAAGAGTCCTCACGTCGGAAATCCTCAGTCCGGCTCGACACCGGTGGATGCTCGCAAAGAGGACCGAAGAAGCCGACAATCTCCTACGATACGTGTTCCATTTAACGACGACGGGGAACGACGACGACGATGTTGGCGGAGGGGCAGTGGTTAACCTGAGAAGCATAACGCAGCATTATTCGGGGAACGTGATGCGACGAATGATGTTCGATAGGCGATACTACGGTGGAGGAAGAGCGGACGGGGGGCCGACGGCGGAGGAAGAAGAGCATATTGGAGCATTGTTTACGATGCTTCAACATGTTTATGCATTTTGTGTATCGGATTACATGCCGTGTTTGAAGGCGTTTGATTTGGATGGTCACGAGAGGACTGTTAAGAAGGCTTTGAATGTTATTAGAAAGTATGAAGAGCCCATCATTGACGAGAGAGTTCAGCAATGGAGAGATGGGAGGAGGACGGAGGCTGAGGACATGTTGGATATCTTCATCTCGCTCAAAGATGGCGATGGGAGGCCATTGTTGTCAGTCAGGGAGATTAAAGCACAGATTACAGAACTGCTTCTTGCAACAGTGGACAATCCATCGAACGCAGTGGAATGGGCCATAGCAGAGATGCTAAACCAGCCCCAAATCCTCCAAACCGCCACCGAAGAACTTGACAGAGTCGTCGGAAAACAGCGCCTCGTCCAAGAATCCGACCTCCCAAATCTCAAATTCCTCACCGCCTGCGCCAGAGAGGCCCTCCGCCTCCACCCAATCGCCCCCTTCAACCTCCCTCACATCGCCACCGCCGATGCCGTCGTCGCCGGCTACTTCATCCCCGCCGGCAGCCACGTCCTCCTAAGCCGCCTTGGACTCGGTCGGAACCCTAGGATTTGGCCCGACCCGATGCGATTCGATCCGAACCGCCATCTCCAAGATCCGGGCGCCGATCCCAACTTGGGGGAGCCTGATCTGAGGTTTATTACGTTCACCAGAGGGCGGAGAGGGTGTATGGGCAGCGCACTTGGGACTGCCATTACGATGATGCTGTTGGCTAGGCTTGTGCAGGGATTTTCTTGGCGGTTGCCGCCCGGTGCGGCGGAGATTGACCTGTCGGAGTCTGACCAGTTGTTTCTGAAGAATCCTCTGTTCGTGTTTGCAGAGCCGCGGCTGCTGGAATCTCTGTACCCTGATTCCGAAACAGGGGAGAAACTTTTTTTATAG 1662 54.21 MAASALALSSSTFLLAICKSFMIFLTGSFMAAVLIWLFSYYGKRKQSVGTAALPPGPSPWPIVGCLPTIWRRKPRYRWIHSVMEDLNTEIACIRLGKTHVIPVMSPELAVEFLKTHDSLFASRPITVTTDMFSDGFLTAGVAPWGDQWRKMRRVLTSEILSPARHRWMLAKRTEEADNLLRYVFHLTTTGNDDDDVGGGAVVNLRSITQHYSGNVMRRMMFDRRYYGGGRADGGPTAEEEEHIGALFTMLQHVYAFCVSDYMPCLKAFDLDGHERTVKKALNVIRKYEEPIIDERVQQWRDGRRTEAEDMLDIFISLKDGDGRPLLSVREIKAQITELLLATVDNPSNAVEWAIAEMLNQPQILQTATEELDRVVGKQRLVQESDLPNLKFLTACAREALRLHPIAPFNLPHIATADAVVAGYFIPAGSHVLLSRLGLGRNPRIWPDPMRFDPNRHLQDPGADPNLGEPDLRFITFTRGRRGCMGSALGTAITMMLLARLVQGFSWRLPPGAAEIDLSESDQLFLKNPLFVFAEPRLLESLYPDSETGEKLFL 553
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 13375271 13379900 - Maker00021805 Lcy2g1257 626022
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1257 553 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 30 539 IPR051382 -
Lcy2g1257 553 SUPERFAMILY Cytochrome P450 52 536 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 FunFam Cytochrome P450 9 46 540 - -
Lcy2g1257 553 Pfam Cytochrome P450 54 527 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 Gene3D Cytochrome P450 48 538 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1257 553 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1252 Lcy-Chr2:13284109 Lcy2g1257 Lcy-Chr2:13375271 0 dispersed
Lcy2g1257 Lcy-Chr2:13375271 Lcy2g1259 Lcy-Chr2:13420769 1.00E-216 dispersed
Lcy2g1257 Lcy-Chr2:13375271 Lcy2g1258 Lcy-Chr2:13391536 1.53E-215 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1257 - - - 0.0