Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1257 | ATGGCAGCCAGTGCCCTAGCTCTGTCTTCTTCAACCTTTCTTCTAGCTATTTGCAAGAGCTTCATGATCTTCTTGACTGGCTCATTCATGGCAGCTGTTCTCATCTGGTTGTTTTCCTATTATGGGAAAAGAAAGCAGTCTGTAGGCACTGCAGCTCTCCCACCCGGTCCGTCTCCATGGCCGATCGTCGGCTGCCTCCCGACGATATGGCGGAGGAAGCCGAGATACCGATGGATTCACAGCGTCATGGAAGACCTAAACACCGAAATCGCTTGCATCCGTCTCGGCAAAACCCATGTCATTCCTGTGATGTCTCCAGAACTCGCCGTCGAGTTTCTAAAGACGCACGACTCTCTATTTGCGTCGCGACCGATCACCGTCACCACCGACATGTTCAGCGACGGGTTCCTCACGGCAGGCGTCGCGCCGTGGGGAGACCAATGGAGGAAGATGAGAAGAGTCCTCACGTCGGAAATCCTCAGTCCGGCTCGACACCGGTGGATGCTCGCAAAGAGGACCGAAGAAGCCGACAATCTCCTACGATACGTGTTCCATTTAACGACGACGGGGAACGACGACGACGATGTTGGCGGAGGGGCAGTGGTTAACCTGAGAAGCATAACGCAGCATTATTCGGGGAACGTGATGCGACGAATGATGTTCGATAGGCGATACTACGGTGGAGGAAGAGCGGACGGGGGGCCGACGGCGGAGGAAGAAGAGCATATTGGAGCATTGTTTACGATGCTTCAACATGTTTATGCATTTTGTGTATCGGATTACATGCCGTGTTTGAAGGCGTTTGATTTGGATGGTCACGAGAGGACTGTTAAGAAGGCTTTGAATGTTATTAGAAAGTATGAAGAGCCCATCATTGACGAGAGAGTTCAGCAATGGAGAGATGGGAGGAGGACGGAGGCTGAGGACATGTTGGATATCTTCATCTCGCTCAAAGATGGCGATGGGAGGCCATTGTTGTCAGTCAGGGAGATTAAAGCACAGATTACAGAACTGCTTCTTGCAACAGTGGACAATCCATCGAACGCAGTGGAATGGGCCATAGCAGAGATGCTAAACCAGCCCCAAATCCTCCAAACCGCCACCGAAGAACTTGACAGAGTCGTCGGAAAACAGCGCCTCGTCCAAGAATCCGACCTCCCAAATCTCAAATTCCTCACCGCCTGCGCCAGAGAGGCCCTCCGCCTCCACCCAATCGCCCCCTTCAACCTCCCTCACATCGCCACCGCCGATGCCGTCGTCGCCGGCTACTTCATCCCCGCCGGCAGCCACGTCCTCCTAAGCCGCCTTGGACTCGGTCGGAACCCTAGGATTTGGCCCGACCCGATGCGATTCGATCCGAACCGCCATCTCCAAGATCCGGGCGCCGATCCCAACTTGGGGGAGCCTGATCTGAGGTTTATTACGTTCACCAGAGGGCGGAGAGGGTGTATGGGCAGCGCACTTGGGACTGCCATTACGATGATGCTGTTGGCTAGGCTTGTGCAGGGATTTTCTTGGCGGTTGCCGCCCGGTGCGGCGGAGATTGACCTGTCGGAGTCTGACCAGTTGTTTCTGAAGAATCCTCTGTTCGTGTTTGCAGAGCCGCGGCTGCTGGAATCTCTGTACCCTGATTCCGAAACAGGGGAGAAACTTTTTTTATAG | 1662 | 54.21 | MAASALALSSSTFLLAICKSFMIFLTGSFMAAVLIWLFSYYGKRKQSVGTAALPPGPSPWPIVGCLPTIWRRKPRYRWIHSVMEDLNTEIACIRLGKTHVIPVMSPELAVEFLKTHDSLFASRPITVTTDMFSDGFLTAGVAPWGDQWRKMRRVLTSEILSPARHRWMLAKRTEEADNLLRYVFHLTTTGNDDDDVGGGAVVNLRSITQHYSGNVMRRMMFDRRYYGGGRADGGPTAEEEEHIGALFTMLQHVYAFCVSDYMPCLKAFDLDGHERTVKKALNVIRKYEEPIIDERVQQWRDGRRTEAEDMLDIFISLKDGDGRPLLSVREIKAQITELLLATVDNPSNAVEWAIAEMLNQPQILQTATEELDRVVGKQRLVQESDLPNLKFLTACAREALRLHPIAPFNLPHIATADAVVAGYFIPAGSHVLLSRLGLGRNPRIWPDPMRFDPNRHLQDPGADPNLGEPDLRFITFTRGRRGCMGSALGTAITMMLLARLVQGFSWRLPPGAAEIDLSESDQLFLKNPLFVFAEPRLLESLYPDSETGEKLFL | 553 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 13375271 | 13379900 | - | Maker00021805 | Lcy2g1257 | 626022 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1257 | 553 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 30 | 539 | IPR051382 | - | |
| Lcy2g1257 | 553 | SUPERFAMILY | Cytochrome P450 | 52 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | FunFam | Cytochrome P450 9 | 46 | 540 | - | - | |
| Lcy2g1257 | 553 | Pfam | Cytochrome P450 | 54 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | Gene3D | Cytochrome P450 | 48 | 538 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 108 | 129 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 330 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 211 | 229 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1257 | 553 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1252 | Lcy-Chr2:13284109 | Lcy2g1257 | Lcy-Chr2:13375271 | 0 | dispersed | |
| Lcy2g1257 | Lcy-Chr2:13375271 | Lcy2g1259 | Lcy-Chr2:13420769 | 1.00E-216 | dispersed | |
| Lcy2g1257 | Lcy-Chr2:13375271 | Lcy2g1258 | Lcy-Chr2:13391536 | 1.53E-215 | tandem |
Pathway information