Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1262 | ATGTTATTCGATAGAAGATACTACAACGATGGAGGGCCAACTTTCGAAGAAGAAGAGGAGCACATTCAAGCATTGCTAACGCTGCTTGAGCATGTTCATGCATTTTCTGTATCTGATTACGTGCCTTGTTTGAAGTTGTTTGATTTGAACGGACACAAGAAGACTATAAAACAAGCTTTCGAAGTAATCAAGAAGCATGACGATTCCATTATAGATGAGAGAGTGCAGCAATGGAAGGATGAGAAGAGAAAAGAGGTGGATGATATTCTTGATATTTTCATCTCGCTTACAGATGAAAATGGAAAGTCGCTATTATCAATCCAAGAGATTAAAGCAAAAATCATGGAGTTACAAATGACAACGATTGGTAATCCTTCAAACGGAGTGGAATGGGCAATGGCGGAGTTATTCAATCAACCAAAAATTCTCCAACAAGCAATAGAGGAATTGGATAGGATAGTTGGAAAAGACAGACTTGTTCAAGAATCCGACATCCCACAACTTAAGTATCTCATAGCTTGTATCAGAGAATCTTTTCGACTTCATACATTTTCACCTTTCAATGTGCCTCATGTCTCAAATTCTGATGCCATTGTAGCTGGTTACTTCATTCCAAAAGGTAGTCAAGTCTTGCTGAGTCGTTTGGGGCTTGGTCGAAATCCGAGGATTTGGGACGATCCATTGAGTTACAATCCACAACGTCATCTCAACGATGAGACAGTTGAATTAGGATTATCCGAACCGAGTCTACGCTTCATTAGCTTCTCCAGAGGGAGAAGAGGTTGCATAGGTAGCTCACTAGGCACAACCATTACCATGATGCTCTTTGCTAGGCTGCTACAAGGGTTTTCATGGAGCTTAATGCCTGGAACCACAAAGGTAAACTTCTCTCACTTTGACGAGCTCGCCCTTCCAAACCCACTCTACTTGTATGTAAAGCCACGTCTATCTCATAATATGTATCCTAGTTAG | 972 | 40.84 | MLFDRRYYNDGGPTFEEEEEHIQALLTLLEHVHAFSVSDYVPCLKLFDLNGHKKTIKQAFEVIKKHDDSIIDERVQQWKDEKRKEVDDILDIFISLTDENGKSLLSIQEIKAKIMELQMTTIGNPSNGVEWAMAELFNQPKILQQAIEELDRIVGKDRLVQESDIPQLKYLIACIRESFRLHTFSPFNVPHVSNSDAIVAGYFIPKGSQVLLSRLGLGRNPRIWDDPLSYNPQRHLNDETVELGLSEPSLRFISFSRGRRGCIGSSLGTTITMMLFARLLQGFSWSLMPGTTKVNFSHFDELALPNPLYLYVKPRLSHNMYPS | 323 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 13465643 | 13468324 | + | Maker00022312 | Lcy2g1262 | 626027 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1262 | 323 | PRINTS | E-class P450 group I signature | 213 | 237 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | PRINTS | E-class P450 group I signature | 252 | 262 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | PRINTS | E-class P450 group I signature | 129 | 155 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | PRINTS | E-class P450 group I signature | 172 | 190 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | PRINTS | E-class P450 group I signature | 262 | 285 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | Pfam | Cytochrome P450 | 12 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | SUPERFAMILY | Cytochrome P450 | 16 | 315 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 255 | 264 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy2g1262 | 323 | Gene3D | Cytochrome P450 | 1 | 320 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1262 | 323 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 1 | 321 | IPR051382 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1255 | Lcy-Chr2:13346661 | Lcy2g1262 | Lcy-Chr2:13465643 | 3.28E-74 | dispersed | |
| Lcy2g1262 | Lcy-Chr2:13465643 | Lcy2g1265 | Lcy-Chr2:13533749 | 5.59E-112 | dispersed | |
| Lcy2g1262 | Lcy-Chr2:13465643 | Lcy2g1263 | Lcy-Chr2:13487861 | 2.18E-163 | tandem |
Pathway information