Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1263 ATGGAAGCTTTCTTAGAAAACCCTGCAACTTCCATGACCAAACCCTTGATTCTCATGGCTTCCATTTGTATGATGTATTATTACTTGAAAAGCAAGCACTCAATCCGGCGAGCAGCAGCTCTCCCACCAGGCCCAAAGCCCTGGCCTCTCCTTGGCTGCATACCAGCAATGTGCACACAATCCCAACCTCACCGATGGATTCACGCAATAATGAAGCAATTCAACACTGAAATTGCCTGCATCCGTCTCGGAAACACCTACATAATTCCCGTCACTTCCCCCGAACTCGCCGTCGAGTTTCTAAAGACGCACGACGCCGCCTTCGCGTCGCGTTCGTCGATTTGCAACACCGTCAACATCTTATCCCATGGATATCTCACCACAGCCTTTTCATCACCGGGAGAGCAATGGAAGAAAATGAGAAGAATACTTGCATCACAGATATTCACTCCATCAACCCTTCAGCAAATGCTTGGCGGTCGAGTCGACGAGGCCGACGCTCTTCTACGTTACGTCTTCCGCCTGACCTCGACGAATGCTGACAATGGAGGTGGCGCAGTGGTTAATGTGAGGAGCATTACACAACATTATTGTGGAAATATCATCAGAAGAATGTTGTTCAATAGAAGATACTACGGACTGGGAAGGGAAGATGAGGGGCCAACTTTGGAAGAAGAAGAACACAATCAAGCATTGCTGACAATTCTTAGGCATGTCAATGCATTCTCTATATCAGATTTCGTGCCTTGCTTGAAGCCGTTTGATTTAGATGGACACCAGAAGATTCTAAGAAATGCTTTGAAAGTCGTTAGAAAGTATGATGAACCCATTATAAATGACAGAATGAAACAATGGAGAGATGGAAAGAAAGAAGTGGTTGAAGACATTCTTGATATTCTCATTTCATATAAAGATGAGAAGAAGAAAATCTCACTGTCAATTGAAGAGATCAAGGCTCAAATCACAGAGCTACAAATTGCAACGATCGACAATCCTTCAAACGCAGTGGAATGGACCATGGCCGAGTTACTGAATCAACCAAAGATTCTGCAGAAAGCAATGGAAGAACTGGATGGAGTAGTTGGAAGAGACAGGCTCGTTCAAGAATCCGACATCCCAAAACTCAAGTATCTCACAGCTTGTATTAGAGAATCCTTTCGACTTCATCCATTTTCACCCTTCAATATTCCTCATGTCTCAAACTCTGACATGGTCGTGGGTGGTTACTTCATTCCCAAAGGCAGTGAAGTCCTGCTGAGCCGTTCAGGTCTCGGTCGAAACTCAAGGATTTGGGAAGATCCAATGAGGTTTAATCCAGAACGTCATCTGATAGATGGGACGGTTGAATTATTGGGATTGTCAGAGCCTAGTTTAAGATTCATTACCTTTACCAGAGGAAGAAGAGGCTGCGTTGGTAGCTCATTGGGCACCAACATTACCATGATGTTGTTTGCTAGATTGCTGCAAGGTTTTTCATGGAGCTTAGTGCCCGGAATGACACCGATCAAATTCTCTGAGTCTGATGAGCTTTGTCTCCCAAAGCCATTACACCTACAAGCACGACCACGACTATCTCATATTATGTACCAAAAATGA 1596 44.49 MEAFLENPATSMTKPLILMASICMMYYYLKSKHSIRRAAALPPGPKPWPLLGCIPAMCTQSQPHRWIHAIMKQFNTEIACIRLGNTYIIPVTSPELAVEFLKTHDAAFASRSSICNTVNILSHGYLTTAFSSPGEQWKKMRRILASQIFTPSTLQQMLGGRVDEADALLRYVFRLTSTNADNGGGAVVNVRSITQHYCGNIIRRMLFNRRYYGLGREDEGPTLEEEEHNQALLTILRHVNAFSISDFVPCLKPFDLDGHQKILRNALKVVRKYDEPIINDRMKQWRDGKKEVVEDILDILISYKDEKKKISLSIEEIKAQITELQIATIDNPSNAVEWTMAELLNQPKILQKAMEELDGVVGRDRLVQESDIPKLKYLTACIRESFRLHPFSPFNIPHVSNSDMVVGGYFIPKGSEVLLSRSGLGRNSRIWEDPMRFNPERHLIDGTVELLGLSEPSLRFITFTRGRRGCVGSSLGTNITMMLFARLLQGFSWSLVPGMTPIKFSESDELCLPKPLHLQARPRLSHIMYQK 531
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 13487861 13490785 - Maker00022149 Lcy2g1263 626028
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1263 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 16 525 IPR051382 -
Lcy2g1263 531 Gene3D Cytochrome P450 35 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 Pfam Cytochrome P450 42 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 SUPERFAMILY Cytochrome P450 37 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g1263 531 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1258 Lcy-Chr2:13391536 Lcy2g1263 Lcy-Chr2:13487861 4.89E-252 dispersed
Lcy2g1259 Lcy-Chr2:13420769 Lcy2g1263 Lcy-Chr2:13487861 5.28E-252 dispersed
Lcy2g1263 Lcy-Chr2:13487861 Lcy13g0101 Lcy-Chr13:981505 1.10E-74 dispersed
Lcy2g1263 Lcy-Chr2:13487861 Lcy2g1265 Lcy-Chr2:13533749 1.07E-136 proximal
Lcy2g1262 Lcy-Chr2:13465643 Lcy2g1263 Lcy-Chr2:13487861 2.18E-163 tandem
Lcy12g1765 Lcy-Chr12:38454227 Lcy2g1263 Lcy-Chr2:13487861 5.32E-38 wgd
Lcy2g1263 Lcy-Chr2:13487861 Lcy8g0966 Lcy-Chr8:34203358 3.39E-25 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1263 - - - 0.0