Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1263 | ATGGAAGCTTTCTTAGAAAACCCTGCAACTTCCATGACCAAACCCTTGATTCTCATGGCTTCCATTTGTATGATGTATTATTACTTGAAAAGCAAGCACTCAATCCGGCGAGCAGCAGCTCTCCCACCAGGCCCAAAGCCCTGGCCTCTCCTTGGCTGCATACCAGCAATGTGCACACAATCCCAACCTCACCGATGGATTCACGCAATAATGAAGCAATTCAACACTGAAATTGCCTGCATCCGTCTCGGAAACACCTACATAATTCCCGTCACTTCCCCCGAACTCGCCGTCGAGTTTCTAAAGACGCACGACGCCGCCTTCGCGTCGCGTTCGTCGATTTGCAACACCGTCAACATCTTATCCCATGGATATCTCACCACAGCCTTTTCATCACCGGGAGAGCAATGGAAGAAAATGAGAAGAATACTTGCATCACAGATATTCACTCCATCAACCCTTCAGCAAATGCTTGGCGGTCGAGTCGACGAGGCCGACGCTCTTCTACGTTACGTCTTCCGCCTGACCTCGACGAATGCTGACAATGGAGGTGGCGCAGTGGTTAATGTGAGGAGCATTACACAACATTATTGTGGAAATATCATCAGAAGAATGTTGTTCAATAGAAGATACTACGGACTGGGAAGGGAAGATGAGGGGCCAACTTTGGAAGAAGAAGAACACAATCAAGCATTGCTGACAATTCTTAGGCATGTCAATGCATTCTCTATATCAGATTTCGTGCCTTGCTTGAAGCCGTTTGATTTAGATGGACACCAGAAGATTCTAAGAAATGCTTTGAAAGTCGTTAGAAAGTATGATGAACCCATTATAAATGACAGAATGAAACAATGGAGAGATGGAAAGAAAGAAGTGGTTGAAGACATTCTTGATATTCTCATTTCATATAAAGATGAGAAGAAGAAAATCTCACTGTCAATTGAAGAGATCAAGGCTCAAATCACAGAGCTACAAATTGCAACGATCGACAATCCTTCAAACGCAGTGGAATGGACCATGGCCGAGTTACTGAATCAACCAAAGATTCTGCAGAAAGCAATGGAAGAACTGGATGGAGTAGTTGGAAGAGACAGGCTCGTTCAAGAATCCGACATCCCAAAACTCAAGTATCTCACAGCTTGTATTAGAGAATCCTTTCGACTTCATCCATTTTCACCCTTCAATATTCCTCATGTCTCAAACTCTGACATGGTCGTGGGTGGTTACTTCATTCCCAAAGGCAGTGAAGTCCTGCTGAGCCGTTCAGGTCTCGGTCGAAACTCAAGGATTTGGGAAGATCCAATGAGGTTTAATCCAGAACGTCATCTGATAGATGGGACGGTTGAATTATTGGGATTGTCAGAGCCTAGTTTAAGATTCATTACCTTTACCAGAGGAAGAAGAGGCTGCGTTGGTAGCTCATTGGGCACCAACATTACCATGATGTTGTTTGCTAGATTGCTGCAAGGTTTTTCATGGAGCTTAGTGCCCGGAATGACACCGATCAAATTCTCTGAGTCTGATGAGCTTTGTCTCCCAAAGCCATTACACCTACAAGCACGACCACGACTATCTCATATTATGTACCAAAAATGA | 1596 | 44.49 | MEAFLENPATSMTKPLILMASICMMYYYLKSKHSIRRAAALPPGPKPWPLLGCIPAMCTQSQPHRWIHAIMKQFNTEIACIRLGNTYIIPVTSPELAVEFLKTHDAAFASRSSICNTVNILSHGYLTTAFSSPGEQWKKMRRILASQIFTPSTLQQMLGGRVDEADALLRYVFRLTSTNADNGGGAVVNVRSITQHYCGNIIRRMLFNRRYYGLGREDEGPTLEEEEHNQALLTILRHVNAFSISDFVPCLKPFDLDGHQKILRNALKVVRKYDEPIINDRMKQWRDGKKEVVEDILDILISYKDEKKKISLSIEEIKAQITELQIATIDNPSNAVEWTMAELLNQPKILQKAMEELDGVVGRDRLVQESDIPKLKYLTACIRESFRLHPFSPFNIPHVSNSDMVVGGYFIPKGSEVLLSRSGLGRNSRIWEDPMRFNPERHLIDGTVELLGLSEPSLRFITFTRGRRGCVGSSLGTNITMMLFARLLQGFSWSLVPGMTPIKFSESDELCLPKPLHLQARPRLSHIMYQK | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 13487861 | 13490785 | - | Maker00022149 | Lcy2g1263 | 626028 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1263 | 531 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 16 | 525 | IPR051382 | - | |
| Lcy2g1263 | 531 | Gene3D | Cytochrome P450 | 35 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | Pfam | Cytochrome P450 | 42 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | SUPERFAMILY | Cytochrome P450 | 37 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 197 | 215 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 379 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1263 | 531 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1258 | Lcy-Chr2:13391536 | Lcy2g1263 | Lcy-Chr2:13487861 | 4.89E-252 | dispersed | |
| Lcy2g1259 | Lcy-Chr2:13420769 | Lcy2g1263 | Lcy-Chr2:13487861 | 5.28E-252 | dispersed | |
| Lcy2g1263 | Lcy-Chr2:13487861 | Lcy13g0101 | Lcy-Chr13:981505 | 1.10E-74 | dispersed | |
| Lcy2g1263 | Lcy-Chr2:13487861 | Lcy2g1265 | Lcy-Chr2:13533749 | 1.07E-136 | proximal | |
| Lcy2g1262 | Lcy-Chr2:13465643 | Lcy2g1263 | Lcy-Chr2:13487861 | 2.18E-163 | tandem | |
| Lcy12g1765 | Lcy-Chr12:38454227 | Lcy2g1263 | Lcy-Chr2:13487861 | 5.32E-38 | wgd | |
| Lcy2g1263 | Lcy-Chr2:13487861 | Lcy8g0966 | Lcy-Chr8:34203358 | 3.39E-25 | wgd |
Pathway information