Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g1328 ATGGCCACTCAGGCTCTTGTTTCGTCTTCTTTAACCTCTTCAGTCGGCGCTGCCAGGCAGAGATTAGGACCAAAACCCTCCTCTGGATCCTCCAGAAAAGCTGCTTCTTTTGTTGTTAGAGCTGAAGGCGGAGCTCCTGTTAAGCTTTTGAGTTTGGTATGGCTCAATCTTCGTCAATTTAATGTTATGTTATCGTTGCAGCAAGGAGCAGATAGACAACTATGGTTCGCATCAAAACAAAGTCTTTCTTACCTAGATGGAAGTCTCCCGGGCGACTACGGATTTGACCCATTGGGGCTATCGGACCCCGAAGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGCGATTTGCCATGTTGGGAGCAGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCTCCAGAAACAGCCCTCCCATGGTTCAAAACTGGGGTCATCCCACCAGCAGGGACCTACAACTACTGGGCAGACCCCTACACACTCTTTGTCTTAGAGATGGCTCTAATGGGATTTGCTGAGCACAGAAGATTTCAAGATTGGGCCAATCCAGGGTCCATGGGGAAGCAATACTTTTTGGGGCTAGAGAAGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCTCTAGGGTTTGGAAAAGATGAGAAGTCAATGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCAATCTTGGGTTACTTTGTACAAGGTCTTGTGACAGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTGTCTGACCCAGTCAACAACAATGTTTTGACCAGCCTTAAATTCCATTAG 879 48.92 MATQALVSSSLTSSVGAARQRLGPKPSSGSSRKAASFVVRAEGGAPVKLLSLVWLNLRQFNVMLSLQQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14718579 14720544 - Maker00022071 Lcy2g1328 626093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g1328 292 FunFam Chlorophyll a-b binding protein, chloroplastic 73 291 - -
Lcy2g1328 292 Pfam Chlorophyll A-B binding protein 83 262 IPR022796 -
Lcy2g1328 292 SUPERFAMILY Chlorophyll a-b binding protein 71 288 - -
Lcy2g1328 292 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 287 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Lcy2g1328 292 Gene3D Chlorophyll a/b binding protein domain 73 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g1328 Lcy-Chr2:14718579 Lcy4g0371 Lcy-Chr4:4641525 1.18E-39 dispersed
Lcy2g1328 Lcy-Chr2:14718579 Lcy5g2537 Lcy-Chr5:48148995 6.34E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g1328 K08909 - csv:101202993 515.768