Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g1368 | ATGGAGCATTTCTTCATCTCTCTCTTAATCCTCTTCTTCTCCTTCATCTCTCTCACTCTCTTCGTCCTCTTCTACAAGCACAGATCCTCTTTCTCCTATCCAAACACTCCTCCGGGCTCCATCGGTATTCCCATCCTCGGCGAGACTCTCGAGTTCTTCTCCACCGGCTGGAAAGGCGAGCCCGAGAAGTTCATCTTCGACCGTCTCACTAAGTACAAGTCCGATATCTTCAAGACCTCCATCGTCGGCGTTCCGGCCGCCATCTTCTGCGGCCCTGTCTGCAACAAGTTCCTCTTCTCCAATGAGAACAAACTCGTCACCGCTTGGTGGCCCGACTCCGTCAACAAAATCTTCCCCTCTTCCACGCAGACTAGCTCCATGGAGGAAGCTAAGAAGCTCAAGAAGCTCCTCCCGCAGTTCCTTAAGCCCGAGGCGCTACAGAGATACATCGGAATCATGGACGAACTCGCTCACCGCCACTTCGCTTCCTCCTGGGAGAACAAAGAACAAGTCCTCGTGTTTCCCCTCGCCAAAAGCTTCACGTTCTCTCTGGCGTGCCGATTGTTCGTGAGCGTGGACGATCCAATCCACGTGGAGAGATTATCGGGGCCGTTTCAGCACATCGCGGCAGGGATCATATCGATGCCGATCGATTTACCAGGAACGCCGTTCCATCGAGGGATTAAGGCGTCGAACTACATTAGAAAGGAACTTCTGTCGATCGTGAAGCAGAGGAAATCGGATCTGGCGGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACCTGCGATGAGAGCGGACAGTACATGAACGAAGCGGATATTGCCGATAAGATTCTCGGATTGTTGATCGGCGGCCATGATACTGCCAGCGCCGCCTGTACTTTCATCGTCAAGTTTCTTGCTGAGCTTCCTCATATCTACGACGGCGTCTACAGAGGTCTTGACCTTATGGTCAAAGGGGTTAAAGAGCAAATGGAAATAGCAAAAGCAAAAGCCCCAGGGGAGCTGTTGAACTGGGAAGACATTAAGAAGATGAAATATTCATGGAATGTGGCATGTGAGGTTCTGAGACTTGCTTCCCCACTCCAAGGTGCCTTTAGGGAAGCTATGAACGACTTCGTTTTCAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATATTGGAGTTCAAACTCAACACACAAAAACGCAGACTACTTCCCAGAGCCCTACAAATTCGACCCATCAAGATTCGAAGGCGACGGCCCTGCGCCCTACACCTTTGTGCCCTTCGGCGGAGGGCCAAGAATGTGCCCTGGAAAGGAGTACGCCAGGCTCGAGATTCTGGTGTTCATGCACAATCTGGTCAAGAGATTCAAATGGGCAAAGATTCTTGAGAAAGAGAAGATCGTCGTTGACCCAATGCCAATCCCTCAAAAAGGTCTACCCGTTCGCCTCTTTCCTCATAAATCTGTCTCTGTTTAA | 1482 | 51.01 | MEHFFISLLILFFSFISLTLFVLFYKHRSSFSYPNTPPGSIGIPILGETLEFFSTGWKGEPEKFIFDRLTKYKSDIFKTSIVGVPAAIFCGPVCNKFLFSNENKLVTAWWPDSVNKIFPSSTQTSSMEEAKKLKKLLPQFLKPEALQRYIGIMDELAHRHFASSWENKEQVLVFPLAKSFTFSLACRLFVSVDDPIHVERLSGPFQHIAAGIISMPIDLPGTPFHRGIKASNYIRKELLSIVKQRKSDLAEGKASPTQDILSHMLLTCDESGQYMNEADIADKILGLLIGGHDTASAACTFIVKFLAELPHIYDGVYRGLDLMVKGVKEQMEIAKAKAPGELLNWEDIKKMKYSWNVACEVLRLASPLQGAFREAMNDFVFNGFYIPKGWKLYWSSNSTHKNADYFPEPYKFDPSRFEGDGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWAKILEKEKIVVDPMPIPQKGLPVRLFPHKSVSV | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15669979 | 15675630 | + | Maker00022695 | Lcy2g1368 | 626133 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g1368 | 493 | Gene3D | Cytochrome P450 | 26 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PANTHER | CYTOCHROME P450 26 | 36 | 466 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
Lcy2g1368 | 493 | Pfam | Cytochrome P450 | 37 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | SUPERFAMILY | Cytochrome P450 | 28 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | CDD | CYP90-like | 68 | 487 | - | - | |
Lcy2g1368 | 493 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | FunFam | Taxadiene 5-alpha hydroxylase | 27 | 488 | - | - | |
Lcy2g1368 | 493 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Lcy2g1368 | 493 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy2g1368 | 493 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0957 | Lcy-Chr1:8398741 | Lcy2g1368 | Lcy-Chr2:15669979 | 3.01E-44 | dispersed | |
Lcy2g1368 | Lcy-Chr2:15669979 | Lcy9g1199 | Lcy-Chr9:36382889 | 5.39E-109 | dispersed | |
Lcy2g0361 | Lcy-Chr2:2974152 | Lcy2g1368 | Lcy-Chr2:15669979 | 1.44E-67 | transposed | |
Lcy2g0362 | Lcy-Chr2:2981515 | Lcy2g1368 | Lcy-Chr2:15669979 | 1.44E-154 | transposed | |
Lcy12g0941 | Lcy-Chr12:14415155 | Lcy2g1368 | Lcy-Chr2:15669979 | 1.32E-29 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g1368 | K20667 | - | csv:101206033 | 833.172 |