Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1679 | ATGGATTTTAGGGTTTCAATTTGGACGGTGGTTATGGTGCTGTTATTGAGATGGGCGTGGAGATTTTTGAACTGGGTTTGGTTGAAGCCCAAGAAGCTTGAAAAGTGCCTCAGAGACCAAGGATTCGCCGGAAATCCTTACCGGCTTTTCTCCGGCGACATGAAGGAAAGAGCCGCCATGATGCAGCACGCCAAATCCAAACCCATGAATTTCTCCCATGATATTGCTCCACGTGTCATCCCCTCCATATATCACACCATCCACAAATATGGGAAGAAGTCGTTGATGTGGATTGGACCGTATCCAAGAGTGCACATCATGGACCCTGAGCAATTTAAAGCTGCCTTTTCTCTAACCTCCGATATTCAAAAGCCAAGTTTTAACCCTCTTGCTAGGTTGCTTTTTGATGGACTTATTAATCATGAAGGACAAAAATGGGCTAAGCATAGAAAGATAATCAATCCTGCATTTCATTTCGAGAAGTTGAAGAGTTGCAATGAGATAATTAGCAAATGGGAAAGAATGATCTCAGAACACGGATTTTGTGAATTGGATGTGATGCCTCATTTGCAAAATTTGGCAGCTGATGTCATTTCTCGAACCGCATTTGGAAGTAGTTATGAAGAAGGAAAAATCATCTTTGAACATCTAAAAGAATTGACTAATTTGGTCATTGAAGTTAATTCTAGAGTTTACATACCCGGATGGAGGTTTCTACCAACCAAGTCTAACAATAGAATGAAAAAGATAAGTAATGAAATAAAAACTCTACTCTTTAGCCTTGTCAACAAAAGGCATACGGCTATGAAGGCAGGTGAAACCATGCCTACTGATCTATTAAGCATCCTCGTACAATCAAATTTCAAAGAAATTCAAGAACATGGAAACAACAAGAATATTGGAATGAGCATACAAGAAATGGTCGAAGAATGTAGGGTTTTCTATTTTGCTGGCCAAGAAACCACTGCGGTGTTACTAGTTTGGACCATGGTTTTGTTGAGCTCATATTCAAAATGGCAACATCGGGCAAGAGCAGAAGTCTTAGAAGTCTTTGGTAACAACAAGCCAGATTTTGATGGTTTAAATCGTCTAAAAATTGTTACTATGATTTTGAACGAGGTTCTCAGGCTATATCCACCAGCAGGGATGTTTACTCGTCTTGTTCAAAAGGAAACAAGGCTTGGAAATTTGACTTTACCAGCTGGGGCGATGTTGAGTTTCCCAATTATTCTTTTACATCATGATCAAGAGCTATGGGGTGAAGATGCAAATGAATTTAATCCAGAAAGATTCGCTGAGGGAGTTTCAAAAGCAACAAAAAATCAAACTGGCTTCTTCCCATTCGGATGGGGTCCTCGAATATGCATTGGACAAAATTTTGCAATGATTGAGGCCAAAATTGCATTGGCCATGATCCTACAGCACTTCTCATTTGAGCTTTCTTCTTCGTATACTCATGCTCCTACATCCATTTTAACTATTCAACCTCAACATGGAGCTCATATCATCCTACATAAACTTTAA | 1524 | 39.63 | MDFRVSIWTVVMVLLLRWAWRFLNWVWLKPKKLEKCLRDQGFAGNPYRLFSGDMKERAAMMQHAKSKPMNFSHDIAPRVIPSIYHTIHKYGKKSLMWIGPYPRVHIMDPEQFKAAFSLTSDIQKPSFNPLARLLFDGLINHEGQKWAKHRKIINPAFHFEKLKSCNEIISKWERMISEHGFCELDVMPHLQNLAADVISRTAFGSSYEEGKIIFEHLKELTNLVIEVNSRVYIPGWRFLPTKSNNRMKKISNEIKTLLFSLVNKRHTAMKAGETMPTDLLSILVQSNFKEIQEHGNNKNIGMSIQEMVEECRVFYFAGQETTAVLLVWTMVLLSSYSKWQHRARAEVLEVFGNNKPDFDGLNRLKIVTMILNEVLRLYPPAGMFTRLVQKETRLGNLTLPAGAMLSFPIILLHHDQELWGEDANEFNPERFAEGVSKATKNQTGFFPFGWGPRICIGQNFAMIEAKIALAMILQHFSFELSSSYTHAPTSILTIQPQHGAHIILHKL | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 25043966 | 25050393 | + | Maker00035388 | Lcy2g1679 | 626444 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1679 | 507 | CDD | CYP72 | 80 | 503 | - | - | |
| Lcy2g1679 | 507 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | P450 superfamily signature | 317 | 334 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 10 | 499 | IPR050665 | GO:0004497(PANTHER) | |
| Lcy2g1679 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy2g1679 | 507 | Pfam | Cytochrome P450 | 88 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | FunFam | Cytochrome P450 734A1 | 27 | 507 | - | - | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 306 | 323 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 409 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | PRINTS | E-class P450 group I signature | 326 | 352 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | Gene3D | Cytochrome P450 | 73 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1679 | 507 | SUPERFAMILY | Cytochrome P450 | 76 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1679 | Lcy-Chr2:25043966 | Lcy9g1421 | Lcy-Chr9:39208785 | 1.32E-274 | dispersed | |
| Lcy2g1679 | Lcy-Chr2:25043966 | Lcy2g1758 | Lcy-Chr2:28016628 | 1.37e-313 | wgd | |
| Lcy2g1679 | Lcy-Chr2:25043966 | Lcy9g0284 | Lcy-Chr9:7371433 | 2.28E-275 | wgd |
Pathway information