Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g1758 | ATGGATCTTAAGGCTTCAATTTGGATGGTGGTTATGGTGTTGTTATCGAGATGGGGATGGAAATTTTTGAATTGGATTTGGTTGAAGCCGAAGAAGCTTGAAAAGTGCCTGAGAGAGCAAGGATTCGCCGGAAATCCTTACCGGCTTTTCTCCGGCGACATGAAGGACAGTGCTGCCATGACGGAGCAGGCCAAATCCAAACCCATGAACTTCTCCCATGATATTGTTCCACGTGTCTTCCCCTCCATACATCAAACCATCCACAAATATGGGAAGAAGTCGTTCATGTGGTTTGGAGCGTATCCAAGAGTGCACGTGGTAGACCCTGAACAATTGAAAGCTGCTGTTTGTCTGGTCTATGATATTCAAAAGCCAGGTATCAACCCCTTTCTTAGGTTTCTTCTCAGTGGACTTGTTAGTCTTGAAGGACAAAAATGGGCAAAACACAGAAAGATAATCAACCCTGCCTTTCATTTCCAAAAGTTGAAGGGCATGGTGCCAACAATCTGTGAGAGTTGCAATGAGATGATTAACAAATGGGAAAGAATGATCTCAGAAGATGGATTTTGTGAATTGGATGTGATGCCTCATTTGCAAAATTTGGCAGCTGATGTCATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAAAATCATCTTTCAACATCTAAAAGAATTGACAGATTTGGTCCTTAAAGTTACATCTAGAGTTTACATACCGGGATGGAGGTTTCTACCAACCAAGTCTAACAATAGAATGAAAAAGATAAGTAAAGAAATAAAAACTGTGCTGTTTAGCCTTGTCAATAAAAGGCAAATGAGTATGAAGGCAGGTGACACAGTACATAATAATGATCTATTAAGCATCCTCCTAGAATCAAATTTCAAAGAAATTGAAGAACATGGAAGTAACGATATTGGAATGAGCATAGAAGACATGATCGAAGAATGTAAGGTTTTCTATTTTGCTGGCCAAGAAACCACAGCATTGTTACTAGTTTGGACGATGGTTTTGTTGAGCTCAAATCCAAAATGGCAAGAGCGAGCAAGAGCTGAGGTCCTAGAAGTTTTTGGTAACAACAAACCAGATTTTGATGGTTTAAATCGCCTAAAAATTGTTAGTATGATTTTGAACGAGGTTCTTAGATTATACCCACCGGGAGGAATGTCTAGTCGTCTTATTAAAAAGGAAACAAGACTTGGAAAAGTGAGGCTGCCGGCTGGAGTGATGTTGTACTTTCCAATTGCTCTTATCCATCGCGATCAAGAGCTATGGGGTGAGGATGCAAATGAATTCAATCCACAAAGATTCGCTGAAGGAGTTTCGAAAGCAACACAGAATCAAGCTGGGTTCTTCCCATTTGGATGGGGTCCTCGAATATGCATCGGACAAAATTTTGCCATGATTGAGGCCAAAATTGCACTGTCCATGATCCTACAACACTTCAAATTTGAACTTTCTTCTTCCTATACTCATGCTCCTACATTTGTTTTTACTATTCAACCTCAATATGGAGCTCATATCATCCTACGTAAACTTTAG | 1548 | 40.05 | MDLKASIWMVVMVLLSRWGWKFLNWIWLKPKKLEKCLREQGFAGNPYRLFSGDMKDSAAMTEQAKSKPMNFSHDIVPRVFPSIHQTIHKYGKKSFMWFGAYPRVHVVDPEQLKAAVCLVYDIQKPGINPFLRFLLSGLVSLEGQKWAKHRKIINPAFHFQKLKGMVPTICESCNEMINKWERMISEDGFCELDVMPHLQNLAADVISRTAFGSSYEEGKIIFQHLKELTDLVLKVTSRVYIPGWRFLPTKSNNRMKKISKEIKTVLFSLVNKRQMSMKAGDTVHNNDLLSILLESNFKEIEEHGSNDIGMSIEDMIEECKVFYFAGQETTALLLVWTMVLLSSNPKWQERARAEVLEVFGNNKPDFDGLNRLKIVSMILNEVLRLYPPGGMSSRLIKKETRLGKVRLPAGVMLYFPIALIHRDQELWGEDANEFNPQRFAEGVSKATQNQAGFFPFGWGPRICIGQNFAMIEAKIALSMILQHFKFELSSSYTHAPTFVFTIQPQYGAHIILRKL | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 28016628 | 28022945 | - | Maker00009069 | Lcy2g1758 | 626523 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g1758 | 515 | SUPERFAMILY | Cytochrome P450 | 76 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 507 | IPR050665 | GO:0004497(PANTHER) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 201 | 219 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | PRINTS | P450 superfamily signature | 463 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy2g1758 | 515 | Gene3D | Cytochrome P450 | 71 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g1758 | 515 | FunFam | Cytochrome P450 734A1 | 27 | 515 | - | - | |
| Lcy2g1758 | 515 | CDD | CYP72 | 80 | 511 | - | - | |
| Lcy2g1758 | 515 | Pfam | Cytochrome P450 | 83 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g1758 | Lcy-Chr2:28016628 | Lcy9g1421 | Lcy-Chr9:39208785 | 1.52E-261 | dispersed | |
| Lcy2g1679 | Lcy-Chr2:25043966 | Lcy2g1758 | Lcy-Chr2:28016628 | 1.37e-313 | wgd | |
| Lcy2g1758 | Lcy-Chr2:28016628 | Lcy9g0284 | Lcy-Chr9:7371433 | 6.87E-265 | wgd |
Pathway information