Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g2127 ATGGGTTGTGTTGCGAAGTGCGTTTTCATGATTGTTGTCTTCATGTCGATGCCTTTTCCATCGCAGAACTCCCACATTTTGATTGCTAACTCACTGTTGAATGCAGCAGAGAGCTTCAATGTTAAAGAGCTTGAGAGAGTTTCAGGGAATGATGAGAGTGGAGGAGATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGCTTACAATTGGGAAATCAAAGCCCATCAGATCTCTCGCCTTCGCAGTCGCCATCGCCGTCTCCATCACCGGCCGCCATTGCTCCATCTCCTGTTCCTGTGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGCTTACAGACCTAAAAGACAAGAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCCGCAGGAGTCACCATTTTGATATGCGCTATTGCTGCATTTTGGGTCTGCAAGAAGTTCAAAAGTCGGAGAGAGGAACCTACAGAGAAGCTTTCTATAAAGAGTGAAACAGGAGAGAAGACAGCTGGACCAAAATCTGGCCTTGATCTGTTCGATCTCAGTATGCTTGGAATGGATGTTGAAGAACAGACGCAAACTTCTGTAAGGGAAAAGGAGTTGTCAGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTCGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAACGATGTATGTTAATGAGGAAGATGATAGAAAATCAATACAATGTGAATCTGATGGAGCTGATTCTTCATCTGGGGAGAGAGTCACTCCTGTTAAATCTTGTTCGTCTGACGATGAGGAATCGTTCCATTCTTGTGGGGATTCCAATTTATCGAATGTTCGCCTTTCAAATGCTTCGGAATCTTCTTCTGCTAATGTGATAACAAATTCTACTTGTTCAGTGCCAATTGTGAACTTATCAAGTAAATTGGAAACACAATGTGATGAACCTAACAAACCAATAACTTCTGATCAGTTGCATCTTACCCCTTCTCCTTGTAACTCAGAACTCAAAATGCAGATGGTTTCACATTCTGTAGGTTGCCAAAACCAAAAGAATGTCCCATCTCTATCTCCCCCTCCCCCTCCTCCGCCGCCACCGCCACCTCCAGTCACTGATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACCTCCTCTTCTGCATTGTTAAGATCGTCATCTCCTGCAATGTCAGATTCTTCTTCGCTATCTCAAATACCATGGAACGATCTGCCATCACCTCCAAATGCTGCTAAACCTTCATTACCATCGTCTGCTATTCCTCCACCCCCTTGTCCACCACCAAGTTTGAAAGCAAACGCTTACTCTTTCAAAACTCCACCCCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTCGAAACGAGGGAAATTCACGGCCGAAACTTAAGCCCCTGCATTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAGATGATTGAGTCACTATTTGGCTACAACCAACAAGATTCAATGAAGAATGGTGATTCTAGCAACAAAAGCCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCAACAGAACAAATTTGTGAAGCCATAGAACAAGGGACCGGGTTGCGTTTAAGACAACTTGAAGCACTGGTGAAGATGATACCCACCCAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTGGGGTGTACAGAGAAATTTGTCATACAAATTCTGAGAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGGCTCTTCCTGAAACTACTCGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGGAAAACCTCCCTACTCCACTTCGTCGTCCAAGAAATGATCCGATCAGAAGGAATCCGAGTCTCCGGAAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGACCTCGTCTCCGGCCTGAGCACCGAACTGCACAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTCCTCGCGAGCTCGACGACGAATCTGAACGACGGAATGGCGAAGCTGCAGCAACTGGTGCTGAAGGAGTTGTGTGCGGATGAAGGGAGCGGGAACTTCGTGGGCGCCATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGAGTAATGGCGAGCGTGAGGGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATTTTCGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAGAGCTTCAAGATTGGAAGTTGA 2697 45.79 MGCVAKCVFMIVVFMSMPFPSQNSHILIANSLLNAAESFNVKELERVSGNDESGGDEPFILERVRALLGLKSLQLGNQSPSDLSPSQSPSPSPSPAAIAPSPVPVAAHRVHIHEHSHPHQLRLHKSRPAYRPKRQEDAREGRVRKILVAVLVSAGVTILICAIAAFWVCKKFKSRREEPTEKLSIKSETGEKTAGPKSGLDLFDLSMLGMDVEEQTQTSVREKELSVHKEGERGQEMFDSEFDNVSVSSTKETMYVNEEDDRKSIQCESDGADSSSGERVTPVKSCSSDDEESFHSCGDSNLSNVRLSNASESSSANVITNSTCSVPIVNLSSKLETQCDEPNKPITSDQLHLTPSPCNSELKMQMVSHSVGCQNQKNVPSLSPPPPPPPPPPPPVTDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNAAKPSLPSSAIPPPPCPPPSLKANAYSFKTPPPPPSKLPQFMAFRNEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQQDSMKNGDSSNKSPSPSKHILEAKRLQNLTILLKALNLSTEQICEAIEQGTGLRLRQLEALVKMIPTQEEEAKLLSYEGDIGELGCTEKFVIQILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVLASSTTNLNDGMAKLQQLVLKELCADEGSGNFVGAMKGFLSYVKKTMEEVRKDEEGVMASVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 42702276 42705563 - Maker00028094 Lcy2g2127 626892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g2127 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 489 898 IPR015425 -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 178 198 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 380 398 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 442 466 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 114 129 - -
Lcy2g2127 898 Pfam Formin Homology 2 Domain 493 887 IPR015425 -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 216 239 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 77 100 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 86 100 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 269 283 - -
Lcy2g2127 898 Gene3D Formin, FH2 domain 485 895 IPR042201 -
Lcy2g2127 898 PANTHER FORMIN-RELATED 65 894 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lcy2g2127 898 MobiDBLite consensus disorder prediction 114 138 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 374 481 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 215 301 - -
Lcy2g2127 898 SMART it6_source 489 896 IPR015425 -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 399 440 - -
Lcy2g2127 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 502 892 - -
Lcy2g2127 898 MobiDBLite consensus disorder prediction 254 268 - -
Lcy2g2127 898 Coils Coil 650 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g2127 Lcy-Chr2:42702276 Lcy7g1391 Lcy-Chr7:21760863 4.15E-111 dispersed
Lcy2g2127 Lcy-Chr2:42702276 Lcy8g0729 Lcy-Chr8:26920107 5.89E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g2127 K28090 - csv:101208374 1339.71