Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g2127 | ATGGGTTGTGTTGCGAAGTGCGTTTTCATGATTGTTGTCTTCATGTCGATGCCTTTTCCATCGCAGAACTCCCACATTTTGATTGCTAACTCACTGTTGAATGCAGCAGAGAGCTTCAATGTTAAAGAGCTTGAGAGAGTTTCAGGGAATGATGAGAGTGGAGGAGATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTACTTGGACTCAAGAGCTTACAATTGGGAAATCAAAGCCCATCAGATCTCTCGCCTTCGCAGTCGCCATCGCCGTCTCCATCACCGGCCGCCATTGCTCCATCTCCTGTTCCTGTGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGCTTACAGACCTAAAAGACAAGAAGATGCAAGAGAAGGAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCCGCAGGAGTCACCATTTTGATATGCGCTATTGCTGCATTTTGGGTCTGCAAGAAGTTCAAAAGTCGGAGAGAGGAACCTACAGAGAAGCTTTCTATAAAGAGTGAAACAGGAGAGAAGACAGCTGGACCAAAATCTGGCCTTGATCTGTTCGATCTCAGTATGCTTGGAATGGATGTTGAAGAACAGACGCAAACTTCTGTAAGGGAAAAGGAGTTGTCAGTTCATAAAGAGGGGGAAAGGGGCCAAGAGATGTTCGATTCAGAATTTGATAATGTAAGTGTTTCTTCAACCAAGGAAACGATGTATGTTAATGAGGAAGATGATAGAAAATCAATACAATGTGAATCTGATGGAGCTGATTCTTCATCTGGGGAGAGAGTCACTCCTGTTAAATCTTGTTCGTCTGACGATGAGGAATCGTTCCATTCTTGTGGGGATTCCAATTTATCGAATGTTCGCCTTTCAAATGCTTCGGAATCTTCTTCTGCTAATGTGATAACAAATTCTACTTGTTCAGTGCCAATTGTGAACTTATCAAGTAAATTGGAAACACAATGTGATGAACCTAACAAACCAATAACTTCTGATCAGTTGCATCTTACCCCTTCTCCTTGTAACTCAGAACTCAAAATGCAGATGGTTTCACATTCTGTAGGTTGCCAAAACCAAAAGAATGTCCCATCTCTATCTCCCCCTCCCCCTCCTCCGCCGCCACCGCCACCTCCAGTCACTGATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCTACCTCCTCTTCTGCATTGTTAAGATCGTCATCTCCTGCAATGTCAGATTCTTCTTCGCTATCTCAAATACCATGGAACGATCTGCCATCACCTCCAAATGCTGCTAAACCTTCATTACCATCGTCTGCTATTCCTCCACCCCCTTGTCCACCACCAAGTTTGAAAGCAAACGCTTACTCTTTCAAAACTCCACCCCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTCGAAACGAGGGAAATTCACGGCCGAAACTTAAGCCCCTGCATTGGGACAAAGTAAGAGCTGCACCAGATCGATCAATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAGATGATTGAGTCACTATTTGGCTACAACCAACAAGATTCAATGAAGAATGGTGATTCTAGCAACAAAAGCCCTTCTCCAAGCAAGCATATACTAGAGGCAAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCAACAGAACAAATTTGTGAAGCCATAGAACAAGGGACCGGGTTGCGTTTAAGACAACTTGAAGCACTGGTGAAGATGATACCCACCCAGGAAGAAGAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTGGGGTGTACAGAGAAATTTGTCATACAAATTCTGAGAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCCTGCAAGGAACTAAGATCCAGCAGGCTCTTCCTGAAACTACTCGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTCGGAACAAGCAGAGGAGGCGCAAGAGCATTCAAACTAGACGCACTCCTAAAACTCTCCGACGTCAAAGGAACCGACGGGAAAACCTCCCTACTCCACTTCGTCGTCCAAGAAATGATCCGATCAGAAGGAATCCGAGTCTCCGGAAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGATTACCGAAGAATGGGATTAGACCTCGTCTCCGGCCTGAGCACCGAACTGCACAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTCCTCGCGAGCTCGACGACGAATCTGAACGACGGAATGGCGAAGCTGCAGCAACTGGTGCTGAAGGAGTTGTGTGCGGATGAAGGGAGCGGGAACTTCGTGGGCGCCATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGGAGGTGAGGAAGGACGAAGAAGGAGTAATGGCGAGCGTGAGGGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAGGAGACGAATCCGCTGAGGATTTTCGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAGAGCTTCAAGATTGGAAGTTGA | 2697 | 45.79 | MGCVAKCVFMIVVFMSMPFPSQNSHILIANSLLNAAESFNVKELERVSGNDESGGDEPFILERVRALLGLKSLQLGNQSPSDLSPSQSPSPSPSPAAIAPSPVPVAAHRVHIHEHSHPHQLRLHKSRPAYRPKRQEDAREGRVRKILVAVLVSAGVTILICAIAAFWVCKKFKSRREEPTEKLSIKSETGEKTAGPKSGLDLFDLSMLGMDVEEQTQTSVREKELSVHKEGERGQEMFDSEFDNVSVSSTKETMYVNEEDDRKSIQCESDGADSSSGERVTPVKSCSSDDEESFHSCGDSNLSNVRLSNASESSSANVITNSTCSVPIVNLSSKLETQCDEPNKPITSDQLHLTPSPCNSELKMQMVSHSVGCQNQKNVPSLSPPPPPPPPPPPPVTDRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNAAKPSLPSSAIPPPPCPPPSLKANAYSFKTPPPPPSKLPQFMAFRNEGNSRPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQQDSMKNGDSSNKSPSPSKHILEAKRLQNLTILLKALNLSTEQICEAIEQGTGLRLRQLEALVKMIPTQEEEAKLLSYEGDIGELGCTEKFVIQILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEMIRSEGIRVSGSIMGKISQKNKSRTIEERENDYRRMGLDLVSGLSTELHNVKRAATIDLKVLASSTTNLNDGMAKLQQLVLKELCADEGSGNFVGAMKGFLSYVKKTMEEVRKDEEGVMASVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS | 898 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 42702276 | 42705563 | - | Maker00028094 | Lcy2g2127 | 626892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g2127 | 898 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 489 | 898 | IPR015425 | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 178 | 198 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 380 | 398 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 442 | 466 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 114 | 129 | - | - | |
Lcy2g2127 | 898 | Pfam | Formin Homology 2 Domain | 493 | 887 | IPR015425 | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 216 | 239 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 77 | 100 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 86 | 100 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 269 | 283 | - | - | |
Lcy2g2127 | 898 | Gene3D | Formin, FH2 domain | 485 | 895 | IPR042201 | - | |
Lcy2g2127 | 898 | PANTHER | FORMIN-RELATED | 65 | 894 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 114 | 138 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 374 | 481 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 215 | 301 | - | - | |
Lcy2g2127 | 898 | SMART | it6_source | 489 | 896 | IPR015425 | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 399 | 440 | - | - | |
Lcy2g2127 | 898 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 502 | 892 | - | - | |
Lcy2g2127 | 898 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Lcy2g2127 | 898 | Coils | Coil | 650 | 670 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g2127 | Lcy-Chr2:42702276 | Lcy7g1391 | Lcy-Chr7:21760863 | 4.15E-111 | dispersed | |
Lcy2g2127 | Lcy-Chr2:42702276 | Lcy8g0729 | Lcy-Chr8:26920107 | 5.89E-116 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g2127 | K28090 | - | csv:101208374 | 1339.71 |