Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g2319 ATGAGTCAGACAGAAGTATCAAGGATTAAACCCCCTCTCGTTCCGCTCGCTACTTTGATCGGTCGCGAGCTGAGGAACGAGAAGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATCAAGCCTGATTGCCAGCGTATTCCTGGAAACCCTTCAACTGCATTTTCTGTCTTTGCGATTTTCGATGGACATAATGGCATTTCAGCTGCTATCTTTGCGAAGGAGCATTTACTGGGTAATGTCCTAAGTGCAATTCCTCAAGGAGCCAGTCGAGAAAAATGGCTGCAAGCCCTTCCTCGGGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGTGAAACTTCTGGGACTACTGTTACGTTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCTGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACGGTTGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTTGGCGGCAATGAGGTCGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGCTTTCTAGTGCTGGCGGAAGGCTAATAATTGCTTCTGATGGTATATGGGACGCTTTATCATCTGACATGGCTGCAAAGTCTTGTCGAGGTTTACCTGCAGAGCTTGCTGCTAAGCTAGTTGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATACCATCCGAGCAACCTATATTATTACCACCAACTCCAAGGAAGAAGCAAAATGTGCTTACCTCACTCTTTGGGAAGAAATATCAAAACTCTTTGGGCAAATCTGCAAATAAACTTTCTGCTGTTGGAGTTGTGGAGGAATTGTTTGAAGAAGGTTCCGCTATGCTTGCTGAAAGGTTAGGCAAAGATTTTCCTTCAGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCTCCAAATGAAAATTTGTCAATGAACTCGGGGCCTTTCTTCTCGCCGTCGTCAAAGCCATGGGAAGGTCCATTCCTCTGTGCTAATTGTCGAAGAAAGAAAGACGCCATGGAAGGAAAAAGGCCACCAAAACCTACAATAACCGTTTAG 1287 45.45 MSQTEVSRIKPPLVPLATLIGRELRNEKVEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGASREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSSAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPPTPRKKQNVLTSLFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCANCRRKKDAMEGKRPPKPTITV 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48644550 48649111 - Maker00006448 Lcy2g2319 627084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g2319 428 Gene3D - 37 302 IPR036457 -
Lcy2g2319 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Lcy2g2319 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lcy2g2319 428 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Lcy2g2319 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Lcy2g2319 428 SMART PP2C_4 23 295 IPR001932 -
Lcy2g2319 428 CDD PP2Cc 43 297 IPR001932 -
Lcy2g2319 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Lcy2g2319 428 Pfam Protein phosphatase 2C 61 280 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g2319 Lcy-Chr2:48644550 Lcy7g0489 Lcy-Chr7:4348030 1.84E-199 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g2319 - - - 0.0