Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g2366 | ATGGCTGCTGGTGGTGATTTCTTGCCACCCTTGGTTATGTTGGTTGTCCAATTCCTCTATGCAGGCTTGAACATTACATCAAAGTTAGCCATGGAGTTTGGGATGAATCCACTTGTTCTAGTTGCTTACAGGCAGATGTTTGCTACCATAGCCATAGCTCCTTGTGCTTATTGGTTCGAAAGAAAAGGGAGACCCAAGATTACAAAGCCTATCCTGTTTCAGATTCTACTGTGTTCCTTAACTGGGGCAACAGCTAACCAAGTTTTTTACTATGTTGGGTTAAAATATTCAACCCCCACCATCGCATGTGCATTGACCAATGTCCTGCCTGCTGCAACTTTTGTCCTCGCTGTTCTTTTCAGACAAGAATCTCTGGCGATCAAGACAAGTGCAGGTGCAGCCAAGGTGATCGGAACTGTTGTGTGTGTCGGAGGAGCAATGTTTCTGTCGTTCTACCGTGGACAAACCATCGAGCTGGGTGAATCTGGGGTTCATTGGAAGTATGCTGAGATTATGAGGGGGGAAAGTCCCTCCAGCCAAGGCAGCAGCATATGGGGCTCTCTCTGCTTAATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTAATCCAAGCGAGAGTGAACGAGAAGTTTCCAGCTCCCTACACGAGCACGGCTCTCATGACTTTCATGGCAACCATTCAATGTGGAGCAATCGCCATAGGCATTGAACACAAGTCTGCTGCAGCTTGGTCATTGAAAAACTCAATCAGGCTCGTCGGCGCTCTCTATTCGGGAGTGGCGTGCTCTGGGCTTGCATTTTGCCTAACCTCCTGGGGTATCCAAAAGAAAGGTCCTCTCTATGCCTCAGTTTTCAGCCCCTTCTTGCTCGTTATCGTGGCCATTTTCAGCTGGGCCTTCTTTCAAGAAAAATTATACGTAGGAACTGTTGTAGGGTCATTGTTGATTGTTGTTGGGCTATATGCTGTCCTATGGGGAAAGACCAAAGAGGTGAAACTACAACAAGATATCGAAATGGTGGCCGCAGCAGAGGCAAAGCTAGATGACTGTAATAACAAAGATGACTTGGAAGAACAGTCCTATGTGGTTTCAAATGCCAATATTCTCCATAAGTAA | 1116 | 46.59 | MAAGGDFLPPLVMLVVQFLYAGLNITSKLAMEFGMNPLVLVAYRQMFATIAIAPCAYWFERKGRPKITKPILFQILLCSLTGATANQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLFRQESLAIKTSAGAAKVIGTVVCVGGAMFLSFYRGQTIELGESGVHWKYAEIMRGESPSSQGSSIWGSLCLIISSVAWAAWFVIQARVNEKFPAPYTSTALMTFMATIQCGAIAIGIEHKSAAAWSLKNSIRLVGALYSGVACSGLAFCLTSWGIQKKGPLYASVFSPFLLVIVAIFSWAFFQEKLYVGTVVGSLLIVVGLYAVLWGKTKEVKLQQDIEMVAAAEAKLDDCNNKDDLEEQSYVVSNANILHK | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49771275 | 49774228 | - | Maker00006512 | Lcy2g2366 | 627131 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g2366 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 143 | - | - | |
Lcy2g2366 | 371 | Pfam | EamA-like transporter family | 185 | 324 | IPR000620 | GO:0016020(InterPro) | |
Lcy2g2366 | 371 | Pfam | EamA-like transporter family | 11 | 143 | IPR000620 | GO:0016020(InterPro) | |
Lcy2g2366 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 242 | 328 | - | - | |
Lcy2g2366 | 371 | PANTHER | WAT1-RELATED PROTEIN | 11 | 342 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Lcy2g2366 | 371 | Coils | Coil | 333 | 353 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g0794 | Lcy-Chr10:24067703 | Lcy2g2366 | Lcy-Chr2:49771275 | 1.60E-70 | dispersed | |
Lcy10g0796 | Lcy-Chr10:24218987 | Lcy2g2366 | Lcy-Chr2:49771275 | 5.88E-71 | dispersed | |
Lcy2g2366 | Lcy-Chr2:49771275 | Lcy7g0734 | Lcy-Chr7:7054917 | 4.93E-80 | dispersed | |
Lcy12g1488 | Lcy-Chr12:34100437 | Lcy2g2366 | Lcy-Chr2:49771275 | 3.77E-44 | transposed | |
Lcy5g1678 | Lcy-Chr5:39038859 | Lcy2g2366 | Lcy-Chr2:49771275 | 5.39E-57 | transposed | |
Lcy6g0031 | Lcy-Chr6:334775 | Lcy2g2366 | Lcy-Chr2:49771275 | 4.70E-63 | transposed | |
Lcy10g0790 | Lcy-Chr10:23944251 | Lcy2g2366 | Lcy-Chr2:49771275 | 1.18E-65 | wgd | |
Lcy2g2366 | Lcy-Chr2:49771275 | Lcy4g1766 | Lcy-Chr4:43696502 | 9.06E-148 | wgd |
Pathway information
