Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g2394 ATGCCCAAGCTTTTGCTCCTTGGCTTTCTCTTAACACTGCCTTTCACCAAATGGGTTCATGCCTTTCACCCCTATAATCTCTCTGATTCATCTCTCTTCGATTCTTATGACACTTCCTTTGCTGCCACCCTTAATCCTCTCATGGTGGGACTCACTCTCATTCATGGAGCTGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATCAGGAATTGTGTCTATCGGAAAACAACCAGACGGGGATCGTCAAGATTTATGGAGAAGCAAATACCATTTACAGGAATTCTGAGCAACAAAGCTGAAGAAAATCCTGATTTTTTCAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCTGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCAATGGAAGCATTGAAGGCCGAGGGAATGCGCTTTGCAAATCAGGCCTTGCTTTCTGGCTGCTCTGCTGGAGGTTTGGCATCTATTCTACACTGTGATGAGTTTCGAGACTTATTTCCAAGAACTACTAAAGTGAAATGTCTGAGTGATGCTGGACTATTCCTTGACGTGACTGATATATCTGGAGGACACTATATTAGGAACCTATTTGGTGGTGTAGTGGGCTTGCAGGGTGCAGGAAGGAATCTGCCGTCCTTTTGTACTAACCATCTCGACCCAACTTCGTGTTTCTTCCCACAAAATATAATTGCTGGAATTAGAACCCCACTGTTTCTTGTCAATGCAGCATATGATTCCTGGCAGATACAATCTAGTATAGCCCCACCTTCTCTGGATCCGGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAGCCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTCAGGGATTTCTCAAAATCTTATAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGATACATGGTTTGGTGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCCCTGGCTGTTGGAGATTGGTACTTCGACCGAGCAGCGGTCAAAGCGATTGATTGTCCCTATCCTTGCGACAGGACTTGCCACAATCTGGTTTTTAGAAGCGGTTAG 1245 44.1 MPKLLLLGFLLTLPFTKWVHAFHPYNLSDSSLFDSYDTSFAATLNPLMVGLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALKAEGMRFANQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVTDISGGHYIRNLFGGVVGLQGAGRNLPSFCTNHLDPTSCFFPQNIIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVRDFSKSYKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHNLVFRSG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50567219 50572825 - Maker00037641 Lcy2g2394 627159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g2394 414 PANTHER NOTUM-RELATED 45 409 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Lcy2g2394 414 Pfam Pectinacetylesterase 45 391 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1439 Lcy-Chr1:13963702 Lcy2g2394 Lcy-Chr2:50567219 3.64E-126 dispersed
Lcy2g2394 Lcy-Chr2:50567219 Lcy6g0754 Lcy-Chr6:7417325 5.00E-159 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g2394 K19882 - csv:101218273 822.387