Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g2397 ATGGGCATTAAGATTGTCGTGGGAAGAAGTGGGACGGAGATGCTGACCAACGAAGCTGGTGAAGTCACAAGCTATGTCTTTGATGGCAAGCCTCCCGATTTGAAAAAACAAGAACTTGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGAGGACCTGGCAGATGCAATCGAGGTTGGCAACAAGGAGGACATCGAGAAATTCAGTAAAAGGACGGTGAAGGTTACAAAACAGCACAATGATGACTGTAAAAGACTCTTGAGACTCATGGGAGTGCCTGTGATTGAGGCTCCCTCGGAAGCTGAGGCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGCAAGTACCCCTCTCTGCATGATAATGCTTCTTTTGTTTCTTGAATGTGGACCAATGAACTAA 402 45.77 MGIKIVVGRSGTEMLTNEAGEVTSYVFDGKPPDLKKQELAKRYSKRADATEDLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKASTPLCMIMLLLFLECGPMN 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50636808 50638246 + Maker00037636 Lcy2g2397 627162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g2397 133 Gene3D - 3 117 - -
Lcy2g2397 133 SUPERFAMILY PIN domain-like 24 115 IPR029060 -
Lcy2g2397 133 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 87 104 IPR006084 -
Lcy2g2397 133 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 23 42 IPR006084 -
Lcy2g2397 133 ProSitePatterns XPG protein signature 2. 91 105 IPR019974 GO:0016788(InterPro)
Lcy2g2397 133 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 25 114 IPR006084 GO:0008409(PANTHER)|GO:0017108(PANTHER)
Lcy2g2397 133 Pfam XPG I-region 91 115 IPR006086 GO:0004518(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g2397 K04799 - csv:101204273 204.912