Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g0069 ATGGTTGTGAAGACATGGGTCAACCAGAGTGGTAAAGATATTGAATATGTTATACTCATGGTTTATGATGTAACTCCTTTCATGGACGATCATCCTGGAGGTGATGAAGTACTATTGTCTGCAACTGGGAAAGATGCCACGAACGATTTCGAAGATGTTGGGCACAGCGATTCGGCAAGAGAAATGATGGACAAGTATTTCATCGGAGAAATTGATCCTTCGACGGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAAACCCAGTACAACCCAGATAAGACACCTGAGTTTGTGATTAAGATCTTGCAGTTTCTGGTTCCCATATTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATGA 378 41.01 MVVKTWVNQSGKDIEYVILMVYDVTPFMDDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYFIGEIDPSTVPLKKIFIPSQQTQYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1833861 1836573 - Maker00035626 Lcy3g0069 627261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g0069 125 Gene3D - 4 75 IPR036400 -
Lcy3g0069 125 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 20 78 IPR036400 -
Lcy3g0069 125 PRINTS Cytochrome B5 signature 46 53 IPR001199 -
Lcy3g0069 125 PRINTS Cytochrome B5 signature 31 45 IPR001199 -
Lcy3g0069 125 PRINTS Cytochrome B5 signature 21 31 IPR001199 -
Lcy3g0069 125 PRINTS Cytochrome B5 signature 59 71 IPR001199 -
Lcy3g0069 125 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 72 IPR001199 -
Lcy3g0069 125 Pfam Cytochrome b5-like Heme/Steroid binding domain 21 71 IPR001199 -
Lcy3g0069 125 PANTHER CYTOCHROME B5 20 123 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Lcy3g0069 125 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 27 34 IPR018506 GO:0020037(InterPro)
Lcy3g0069 125 SMART Cyt_b5_2 9 72 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g1769 Lcy-Chr11:41500761 Lcy3g0069 Lcy-Chr3:1833861 2.30E-51 dispersed
Lcy12g2032 Lcy-Chr12:41663371 Lcy3g0069 Lcy-Chr3:1833861 6.89E-46 dispersed
Lcy13g0455 Lcy-Chr13:5422322 Lcy3g0069 Lcy-Chr3:1833861 4.47E-47 dispersed
Lcy13g1645 Lcy-Chr13:35406354 Lcy3g0069 Lcy-Chr3:1833861 7.57E-22 dispersed
Lcy3g0069 Lcy-Chr3:1833861 Lcy4g1076 Lcy-Chr4:20360090 1.47E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g0069 K23490 - csv:101207109 211.46