Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g0749 ATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTACTTGGAGGACTTTACTGCGTCTGTGGAAATAAATTTAACTAATGCTATATCCTTTACTGGCATCTTCTTTTATCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTTCAGGTGATTACATGTGGATTTCCTCCATTAGAGGACAGAGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTGTTCTTTCTAAGGAGGAGACTGTATCCCCTTTCTTTCGAGCTATGAAAGGATTTCTTAATATGCAGTGGAATGAAAAGTGCTATCTTGAAAAGAGAGCTGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATTCTTGATGGTTTTGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTTCTCAAGTCTCAGACTACAATTTGGTAGACTAGGAAAAATGATAGCAGCTCATCCACGATTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGCCCATCAACCGTTCTACCTAGGTGTGCTTTGCCAAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGACTTACTTTATAGAATGCGTCGATCCTGTCTCATACCACCTTCTACAGAAGAAACAAATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCTTTCACAAATGACAGCACTTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAATTATCTGCGTTGTAA 1023 41.06 MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFIECVDPVSYHLLQKKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26969692 26982347 - Maker00034891 Lcy3g0749 627941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g0749 340 Pfam DNA polymerase alpha/epsilon subunit B 154 278 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Lcy3g0749 340 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 295 340 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0006261(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0042276(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g2119 Lcy-Chr2:42206451 Lcy3g0749 Lcy-Chr3:26969692 1.93E-187 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g0749 K02325 - csv:101207444 518.079