Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g1121 ATGGGTATCTTTTCGAAGCAGAAATTTTGGAGAACTGGGGCGACCCACGATGATTCGATGGGTTTTAATGGGGCTCCTGCAGCGAGCAAGAGGAAATGGACCGGTTTCATGCCTCTGTTTGTGGCGATGGTGGTCATAGCAGAGATCGCATCTCTGAGTCGGCTGGACATGGCGAAGAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCGCCGGTTTTGCAACAAGGGACTGAAGGTGTTGGGAAAATGGGCACTGGATTGTCCACTGATGATGGAGTAATTGGTTCGGTTAGCTGTGAGGAGTGGCTGGAGAAGGAGGATGCTGTGGAGTATTCTAGGGACTTCAAAAGGGAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGTCAGCAACCTGATGCTGTATTGGGATCACCTCAACAAGGTAGAGTTGCTAGCGTGCTTCGATCAATGGAATCGTCACATTACTATCCAGAGAATAATCTTGCTATGGCGAGACGGAAGGGTTACACTGTGGTTATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCGTGGGCAGAATATGAGATAATGGCACCAGTGCAGCCAAAGACCGAGGCCGCCCTTGCAGCTGCCTTCATTTCGAATTGTGGTGCCCGCAACTTCCGCTTGCAAGCTCTTGATGCGCTTGAGAAGTTGAATGTCAAAATTGATTCATATGGTAGTTGCCATAGGAACCGTGATGGAAGAGTTGACAAAGTGGAAGCTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACCGAAAAGTTTTTCCAATCTCTTGTTGCAGGAACTATTCCCGTGGTGGTTGGCGCTCCAAATATTCAGGAGTTCGCTCCTTCTCCTGATTCATTTTTGCATATCAAGGAATTTTCCGATGTTGAGTCGATCGCCAAGTCCATGAAACACCTTGCTGAAAATCCCAAATCGTACAATCAATCACTGAGATGGAAGTATGATGGTCCATCTGATTCTTTCAAGGCCCTTGTAGATATGGCTGCAGTACACTCATCATGTCGCCTTTGCATCCACTTGGCAACCATCATCCATGAGAAAGAAGAAAACAGTCCCGGGTTCAAGAAACGACCGTGCAAGTGCTCTCGAGGCTCCAAAACCATGTATCATTTATATGTAAGGGAGAGAGGGAGGTTTGAAATGCAATCCATTTTCTTGAGGTCAGGGAATTTGACATTGGAGGCTTTAGAGTCAGCTGTACTCGAAAAGTTCAAATCTTTGAAACACGTACCGATTTGGAAGCAAGAACGACCCGAAAGCATACGAGGAGGAGATGAACTGAAAATATACAGAATATATCCTGTTGGGTTGACTCAAAGGCAGGCTTTATATAGCTTCAGATTCAAAGGTAATGATGATTTCAGAACTCACATAGAAACACACCATTGTGCAAAGATGGAAATCATATTTGTCTGA 1542 45.33 MGIFSKQKFWRTGATHDDSMGFNGAPAASKRKWTGFMPLFVAMVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPVLQQGTEGVGKMGTGLSTDDGVIGSVSCEEWLEKEDAVEYSRDFKREPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAVLGSPQQGRVASVLRSMESSHYYPENNLAMARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEAALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRVDKVEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQEFAPSPDSFLHIKEFSDVESIAKSMKHLAENPKSYNQSLRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATIIHEKEENSPGFKKRPCKCSRGSKTMYHLYVRERGRFEMQSIFLRSGNLTLEALESAVLEKFKSLKHVPIWKQERPESIRGGDELKIYRIYPVGLTQRQALYSFRFKGNDDFRTHIETHHCAKMEIIFV 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36213581 36219805 - Maker00014332 Lcy3g1121 628313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g1121 513 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 384 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Lcy3g1121 513 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 119 389 - -
Lcy3g1121 513 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 170 362 - -
Lcy3g1121 513 Gene3D - 167 361 IPR038577 -
Lcy3g1121 513 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 87 485 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1121 Lcy-Chr3:36213581 Lcy6g0519 Lcy-Chr6:4853929 9.17E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g1121 K00753 - csv:101205170 953.74