Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy3g1497 ATGCCTGCTCTCTGCGCCGCCCGTGTCTTCCAATTGACCCGCGAATTAGGCCACAAGACCGACGGGGAAACCATCCAGTGGCTGCTTCAGCAGGCGGAGCCGTCGATCATCGCCGCTACTGGCTCCGGTACCATCCCTGCCTCCGCCCTCCACGCCGCCGGCGTCTCCGTCTCCGACCACGACACCTCCGTCTCCGCTGCCCTAACCCCCAAAATCGACGCGGTCGCCAGGCCGAATTGGGCGATGATGGGAGCCAATCTGAACAGATCTCACATGGCGACGGGGGGATTCTGGCCGTCGCTTGGCGGAATCGGGGCGGGGTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCACGGATTCGAATTTCAGGGGATGAATTTGGGATCGGTGAATTTCCCGACGATAATCGGGAATCAGCAGCAGCAAGTACCGGGGCTGGAGCTAGGGCTTTCGCAGGAGGGGAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCTCAAATTTATCACCAGATAGGGCAAAATCGGGACTCCTCGGCGCCATTGGAGCAGGATCAAGCTCCTGATAAAGACGACTCTCAAGAATCGAGATGA 612 58.01 MPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDHDTSVSAALTPKIDAVARPNWAMMGANLNRSHMATGGFWPSLGGIGAGFVSENSGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQQQVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIGQNRDSSAPLEQDQAPDKDDSQESR 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41843971 41844582 - Maker00014054 Lcy3g1497 628689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy3g1497 203 MobiDBLite consensus disorder prediction 189 203 - -
Lcy3g1497 203 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Lcy3g1497 203 MobiDBLite consensus disorder prediction 177 203 - -
Lcy3g1497 203 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 179 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Lcy3g1497 203 Pfam TCP family transcription factor 1 66 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1497 Lcy-Chr3:41843971 Lcy5g2557 Lcy-Chr5:48286621 4.64E-22 dispersed
Lcy10g0080 Lcy-Chr10:1077250 Lcy3g1497 Lcy-Chr3:41843971 2.63E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19854 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy3g1497 - - - 0.0