Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy3g1497 | ATGCCTGCTCTCTGCGCCGCCCGTGTCTTCCAATTGACCCGCGAATTAGGCCACAAGACCGACGGGGAAACCATCCAGTGGCTGCTTCAGCAGGCGGAGCCGTCGATCATCGCCGCTACTGGCTCCGGTACCATCCCTGCCTCCGCCCTCCACGCCGCCGGCGTCTCCGTCTCCGACCACGACACCTCCGTCTCCGCTGCCCTAACCCCCAAAATCGACGCGGTCGCCAGGCCGAATTGGGCGATGATGGGAGCCAATCTGAACAGATCTCACATGGCGACGGGGGGATTCTGGCCGTCGCTTGGCGGAATCGGGGCGGGGTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCACGGATTCGAATTTCAGGGGATGAATTTGGGATCGGTGAATTTCCCGACGATAATCGGGAATCAGCAGCAGCAAGTACCGGGGCTGGAGCTAGGGCTTTCGCAGGAGGGGAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCTCAAATTTATCACCAGATAGGGCAAAATCGGGACTCCTCGGCGCCATTGGAGCAGGATCAAGCTCCTGATAAAGACGACTCTCAAGAATCGAGATGA | 612 | 58.01 | MPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDHDTSVSAALTPKIDAVARPNWAMMGANLNRSHMATGGFWPSLGGIGAGFVSENSGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQQQVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIGQNRDSSAPLEQDQAPDKDDSQESR | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 41843971 | 41844582 | - | Maker00014054 | Lcy3g1497 | 628689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy3g1497 | 203 | MobiDBLite | consensus disorder prediction | 189 | 203 | - | - | |
Lcy3g1497 | 203 | ProSiteProfiles | TCP domain profile. | 1 | 39 | IPR017887 | - | |
Lcy3g1497 | 203 | MobiDBLite | consensus disorder prediction | 177 | 203 | - | - | |
Lcy3g1497 | 203 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 179 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER) | |
Lcy3g1497 | 203 | Pfam | TCP family transcription factor | 1 | 66 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy3g1497 | Lcy-Chr3:41843971 | Lcy5g2557 | Lcy-Chr5:48286621 | 4.64E-22 | dispersed | |
Lcy10g0080 | Lcy-Chr10:1077250 | Lcy3g1497 | Lcy-Chr3:41843971 | 2.63E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
19854 | None | None | None | None | Lcy | TF |
Pathway information
